RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 SDC4P31431 198 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 DRD3P35462 400 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 NSFP46459 744 aaKnown RBP23.31■■□□□ 1.32
FAM228B-208ENST00000613899 C21orf59P57076 290 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 UBXN1Q04323 297 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 LAYNQ6UX15 382 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 UNQ6494/PRO21346Q6UXR6 183 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 Q6ZVU0 165 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 TFAP2DQ7Z6R9 452 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 EMC1Q8N766 993 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 FAM131CQ96AQ9 280 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 SKA1Q96BD8 255 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 CCDC114Q96M63 670 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 PSMB7Q99436 277 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 KDM4CQ9H3R0 1056 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 TMPRSS4Q9NRS4 437 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 MPP6Q9NZW5 540 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 VPS51Q9UID3 782 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 PCOLCE2Q9UKZ9 415 aa23.31■■□□□ 1.32
FAM228B-208ENST00000613899 FARP1Q9Y4F1 1045 aaPredicted RBP23.31■■□□□ 1.32
FAM228B-208ENST00000613899 C10orf142B7Z368 130 aa23.3■■□□□ 1.32
FAM228B-208ENST00000613899 MCF2LO15068 1137 aa23.3■■□□□ 1.32
FAM228B-208ENST00000613899 HYAL3O43820 417 aaPredicted RBP23.3■■□□□ 1.32
FAM228B-208ENST00000613899 ENDOD1O94919 500 aa23.3■■□□□ 1.32
FAM228B-208ENST00000613899 TOP3BO95985 862 aaKnown RBP23.3■■□□□ 1.32
FAM228B-208ENST00000613899 SRCP12931 536 aa23.3■■□□□ 1.32
FAM228B-208ENST00000613899 OR1E1P30953 314 aa23.3■■□□□ 1.32
FAM228B-208ENST00000613899 CCT8P50990 548 aa23.3■■□□□ 1.32
FAM228B-208ENST00000613899 CLCN6P51797 869 aa23.3■■□□□ 1.32
FAM228B-208ENST00000613899 ATP11AP98196 1134 aa23.3■■□□□ 1.32
FAM228B-208ENST00000613899 SUZ12Q15022 739 aaKnown RBP23.3■■□□□ 1.32
FAM228B-208ENST00000613899 ARL13BQ3SXY8 428 aa23.3■■□□□ 1.32
FAM228B-208ENST00000613899 ZNF783Q6ZMS7 281 aa23.3■■□□□ 1.32
FAM228B-208ENST00000613899 ATP11CQ8NB49 1132 aa23.3■■□□□ 1.32
FAM228B-208ENST00000613899 SLC30A5Q8TAD4 765 aa23.3■■□□□ 1.32
FAM228B-208ENST00000613899 SETD7Q8WTS6 366 aaKnown RBP23.3■■□□□ 1.32
FAM228B-208ENST00000613899 SLC6A18Q96N87 628 aa23.3■■□□□ 1.32
FAM228B-208ENST00000613899 ERGIC2Q96RQ1 377 aa23.3■■□□□ 1.32
FAM228B-208ENST00000613899 NEUROG3Q9Y4Z2 214 aa23.3■■□□□ 1.32
FAM228B-208ENST00000613899 CABIN1Q9Y6J0 2220 aa23.29■■□□□ 1.32
FAM228B-208ENST00000613899 LRRC10BA6NIK2 292 aa23.29■■□□□ 1.32
FAM228B-208ENST00000613899 VILLO15195 856 aa23.29■■□□□ 1.32
FAM228B-208ENST00000613899 DFNA5O60443 496 aa23.29■■□□□ 1.32
FAM228B-208ENST00000613899 SNAP91O60641 907 aa23.29■■□□□ 1.32
FAM228B-208ENST00000613899 SRGAP2O75044 1071 aa23.29■■□□□ 1.32
FAM228B-208ENST00000613899 CBFA2T3O75081 653 aa23.29■■□□□ 1.32
FAM228B-208ENST00000613899 UNGP13051 313 aaPredicted RBP23.29■■□□□ 1.32
FAM228B-208ENST00000613899 CTSKP43235 329 aa23.29■■□□□ 1.32
FAM228B-208ENST00000613899 GSCP56915 257 aaPredicted RBP23.29■■□□□ 1.32
FAM228B-208ENST00000613899 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.29■■□□□ 1.32
FAM228B-208ENST00000613899 GLRX5Q86SX6 157 aa23.29■■□□□ 1.32
FAM228B-208ENST00000613899 PIP4K2CQ8TBX8 421 aa23.29■■□□□ 1.32
FAM228B-208ENST00000613899 ZYG11BQ9C0D3 744 aa23.29■■□□□ 1.32
FAM228B-208ENST00000613899 PPM1HQ9ULR3 514 aa23.29■■□□□ 1.32
FAM228B-208ENST00000613899 USP24Q9UPU5 2620 aa23.29■■□□□ 1.32
FAM228B-208ENST00000613899 TBC1D3DA0A087WVF3 549 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 TBC1D3IA0A087WXS9 549 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 TBC1D3EA0A087X179 549 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 TBC1D3KA0A087X1G2 549 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 A0A0D9SEW6 157 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 ILVBLA1L0T0 632 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 TBC1D3FA6NER0 549 aaPredicted RBP23.28■■□□□ 1.32
FAM228B-208ENST00000613899 TBC1D3LB9A6J9 549 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 PLRG1O43660 514 aaKnown RBP23.28■■□□□ 1.32
FAM228B-208ENST00000613899 BNIP3LO60238 219 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 PROS1P07225 676 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 TBC1D3HP0C7X1 549 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 PTPN9P43378 593 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 TYRO3Q06418 890 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 NCAPHQ15003 741 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 CDO1Q16878 200 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 TBC1D3GQ6DHY5 549 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 TBC1D3CQ6IPX1 549 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 DBX2Q6ZNG2 339 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 TBC1D3Q8IZP1 549 aaPredicted RBP23.28■■□□□ 1.32
FAM228B-208ENST00000613899 RXFP2Q8WXD0 754 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 NAT10Q9H0A0 1025 aaKnown RBP23.28■■□□□ 1.32
FAM228B-208ENST00000613899 EBF2Q9HAK2 575 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 AASDHPPTQ9NRN7 309 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 PPARGC1AQ9UBK2 798 aaKnown RBP23.28■■□□□ 1.32
FAM228B-208ENST00000613899 SARDHQ9UL12 918 aa23.28■■□□□ 1.32
FAM228B-208ENST00000613899 C2CD4BA6NLJ0 364 aa23.27■■□□□ 1.32
FAM228B-208ENST00000613899 CALB1P05937 261 aa23.27■■□□□ 1.32
FAM228B-208ENST00000613899 FTH1P19P0C7X4 201 aa23.27■■□□□ 1.32
FAM228B-208ENST00000613899 CD38P28907 300 aa23.27■■□□□ 1.32
FAM228B-208ENST00000613899 NUDT1P36639 197 aa23.27■■□□□ 1.32
FAM228B-208ENST00000613899 METAP1P53582 386 aa23.27■■□□□ 1.32
FAM228B-208ENST00000613899 NRG1Q02297 640 aaPredicted RBP23.27■■□□□ 1.32
FAM228B-208ENST00000613899 CLEC16AQ2KHT3 1053 aa23.27■■□□□ 1.32
FAM228B-208ENST00000613899 C15orf59Q2T9L4 293 aaPredicted RBP23.27■■□□□ 1.32
FAM228B-208ENST00000613899 CCDC14Q49A88 953 aa23.27■■□□□ 1.32
FAM228B-208ENST00000613899 SLC45A4Q5BKX6 768 aa23.27■■□□□ 1.32
FAM228B-208ENST00000613899 STRADAQ7RTN6 431 aa23.27■■□□□ 1.32
FAM228B-208ENST00000613899 AOPEPQ8N6M6 819 aa23.27■■□□□ 1.32
FAM228B-208ENST00000613899 BAHD1Q8TBE0 780 aaPredicted RBP23.27■■□□□ 1.32
FAM228B-208ENST00000613899 CDC6Q99741 560 aa23.27■■□□□ 1.32
FAM228B-208ENST00000613899 HSD3B7Q9H2F3 369 aa23.27■■□□□ 1.32
FAM228B-208ENST00000613899 ADAM22Q9P0K1 906 aa23.27■■□□□ 1.32
FAM228B-208ENST00000613899 ZNF212Q9UDV6 495 aa23.27■■□□□ 1.32
FAM228B-208ENST00000613899 APOBEC2Q9Y235 224 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms