RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 HSFY1Q96LI6 401 aa17.7■□□□□ 0.42
CSNK1E-215ENST00000612795 FAM117AQ9C073 453 aa17.7■□□□□ 0.42
CSNK1E-215ENST00000612795 WDR70Q9NW82 654 aa17.7■□□□□ 0.42
CSNK1E-215ENST00000612795 CFAP45Q9UL16 551 aa17.7■□□□□ 0.42
CSNK1E-215ENST00000612795 NAALADL1Q9UQQ1 740 aa17.7■□□□□ 0.42
CSNK1E-215ENST00000612795 RP1P56715 2156 aa17.7■□□□□ 0.42
CSNK1E-215ENST00000612795 PTPN13Q12923 2485 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 TCAF2A6NFQ2 919 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 ALOX15BO15296 676 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 SART1O43290 800 aaKnown RBP17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 NEBLO76041 1014 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 F13A1P00488 732 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 PAEPP09466 180 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 HNRNPA2B1P22626 353 aaKnown RBP17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 CSRP3P50461 194 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 STILQ15468 1287 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 FOXR1Q6PIV2 292 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 RNF34Q969K3 372 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 BTN2A3PQ96KV6 586 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 TRIM62Q9BVG3 475 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 TRIM4Q9C037 500 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 ST7Q9NRC1 585 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 DNAJC28Q9NX36 388 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 PPM1HQ9ULR3 514 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 COQ4Q9Y3A0 265 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 PCDHB4Q9Y5E5 795 aa17.69■□□□□ 0.42
CSNK1E-215ENST00000612795 LY6G6EA0A0G2JKS1 128 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 K7ESM1 405 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 MCF2LO15068 1137 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 SCAMP1O15126 338 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 FYNP06241 537 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 ZSCAN22P10073 491 aaPredicted RBP17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 BRD2P25440 801 aaKnown RBP17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 OXCT1P55809 520 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 TAS2R38P59533 333 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 MCCD1P59942 119 aaPredicted RBP17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 HNRNPKP61978 463 aaKnown RBP eCLIP17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 CCDC15Q0P6D6 951 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 NFATC3Q12968 1075 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 CNGA2Q16280 664 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 ZSCAN23Q3MJ62 389 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 ZC3H12AQ5D1E8 599 aaKnown RBP17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 RABGAP1LQ5R372 815 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 PIP5KL1Q5T9C9 394 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 TTC39BQ5VTQ0 682 aaPredicted RBP17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 ATL3Q6DD88 541 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 NEK5Q6P3R8 708 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 PTAR1Q7Z6K3 402 aaPredicted RBP17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 HORMAD1Q86X24 394 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 SLC22A18ASQ8N1D0 253 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 UBR7Q8N806 425 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 ATP6V0D2Q8N8Y2 350 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 IFT43Q96FT9 208 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 ATXN7L3BQ96GX2 97 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 PPP1R9BQ96SB3 815 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 CAAP1Q9H8G2 361 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 DYRK4Q9NR20 520 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 SSUH2Q9Y2M2 353 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 U3KQA8 63 aa17.68■□□□□ 0.42
CSNK1E-215ENST00000612795 CPED1A4D0V7 1026 aa17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 H3BM21 787 aa17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 KPNA3O00505 521 aaPredicted RBP17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 ATP9BO43861 1147 aa17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 LZTS3O60299 673 aaPredicted RBP17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 CENPBP07199 599 aaPredicted RBP17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 TGM2P21980 687 aa17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 PLK1P53350 603 aa17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 CLDN2P57739 230 aa17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 DLG2Q15700 870 aa17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 CDKN3Q16667 212 aa17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 ZNF542PQ5EBM4 170 aa17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 C6orf132Q5T0Z8 1188 aa17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 ZCCHC8Q6NZY4 707 aaKnown RBP17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 EFL1Q7Z2Z2 1120 aaKnown RBP17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 ARL14Q8N4G2 192 aa17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 GRAMD1AQ96CP6 724 aa17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 SLC46A1Q96NT5 459 aa17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 SLC12A6Q9UHW9 1150 aa17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 FARP1Q9Y4F1 1045 aaPredicted RBP17.67■□□□□ 0.42
CSNK1E-215ENST00000612795 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 A6NNZ2 444 aa17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 PCDH8O95206 1070 aa17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 SYKP43405 635 aa17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 VASPP50552 380 aaPredicted RBP17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 SKOR1P84550 965 aa17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 DNM1Q05193 864 aaKnown RBP17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 DPYDQ12882 1025 aa17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 ZNF177Q13360 481 aaPredicted RBP17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 ZNF284Q2VY69 593 aa17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 SYPL2Q5VXT5 272 aa17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 OR6B2Q6IFH4 312 aa17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 CXorf57Q6NSI4 855 aaKnown RBP17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 GCNT7Q6ZNI0 430 aa17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 RBM44Q6ZP01 1051 aaKnown RBP17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 ZNF548Q8NEK5 533 aaPredicted RBP17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 ARRDC3Q96B67 414 aa17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 CCDC114Q96M63 670 aa17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 NOX5Q96PH1 765 aa17.66■□□□□ 0.42
CSNK1E-215ENST00000612795 ZSWIM1Q9BR11 485 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms