RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 ARHGAP20Q9P2F6 1191 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 PPM1HQ9ULR3 514 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 PCDHGA1Q9Y5H4 931 aa18.26■□□□□ 0.51
SSBP1-215ENST00000612337 C1QTNF3-AMACRE9PGA6 284 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 MCF2LO15068 1137 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 RTN2O75298 545 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 PNMA6AP0CW24 399 aaPredicted RBP18.25■□□□□ 0.51
SSBP1-215ENST00000612337 EPHA8P29322 1005 aaPredicted RBP18.25■□□□□ 0.51
SSBP1-215ENST00000612337 ARRB1P49407 418 aaPredicted RBP18.25■□□□□ 0.51
SSBP1-215ENST00000612337 CXCR3P49682 368 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 CNTN1Q12860 1018 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 CAMK2BQ13554 666 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 CCDC157Q569K6 752 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 BRMS1LQ5PSV4 323 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 AGBL4Q5VU57 503 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 DHRS13Q6UX07 377 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 Q6ZVU0 165 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 IQCHQ86VS3 1027 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 TRIM69Q86WT6 500 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 FAM114A1Q8IWE2 563 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 OXR1Q8N573 874 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 MFSD2AQ8NA29 543 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 PIP4K2CQ8TBX8 421 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 PGAP3Q96FM1 320 aaPredicted RBP18.25■□□□□ 0.51
SSBP1-215ENST00000612337 TKTL2Q9H0I9 626 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 MUC3BQ9H195 1237 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 WDCPQ9H6R7 721 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 PLCB1Q9NQ66 1216 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.25■□□□□ 0.51
SSBP1-215ENST00000612337 STAP1Q9ULZ2 295 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 DMTF1Q9Y222 760 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 HS3ST2Q9Y278 367 aa18.25■□□□□ 0.51
SSBP1-215ENST00000612337 URB1O60287 2271 aaKnown RBP18.25■□□□□ 0.51
SSBP1-215ENST00000612337 FAM149AA5PLN7 773 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 TRABD2BA6NFA1 517 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 ENC1O14682 589 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 CNTN5O94779 1100 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 ADCY5O95622 1261 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 ZNF18P17022 549 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 CDH5P33151 784 aaPredicted RBP18.24■□□□□ 0.51
SSBP1-215ENST00000612337 GABRB2P47870 512 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 RXRGP48443 463 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 DPY19L2P1Q6NXN4 242 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 TMPRSS12Q86WS5 348 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 TMEM35BQ8NCS4 154 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 NT5C3BQ969T7 300 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 CNDP2Q96KP4 475 aaKnown RBP18.24■□□□□ 0.51
SSBP1-215ENST00000612337 NDST4Q9H3R1 872 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 ANLNQ9NQW6 1124 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 TMEM51Q9NW97 253 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 RAXQ9Y2V3 346 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 PAXBP1Q9Y5B6 917 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 IGSF10Q6WRI0 2623 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 BAHCC1Q9P281 2608 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 DOCK9Q9BZ29 2069 aa18.24■□□□□ 0.51
SSBP1-215ENST00000612337 MAGEC1O60732 1142 aa18.23■□□□□ 0.51
SSBP1-215ENST00000612337 LDOC1O95751 146 aaPredicted RBP18.23■□□□□ 0.51
SSBP1-215ENST00000612337 RHOCP08134 193 aa18.23■□□□□ 0.51
SSBP1-215ENST00000612337 C1SP09871 688 aa18.23■□□□□ 0.51
SSBP1-215ENST00000612337 CDK4P11802 303 aa18.23■□□□□ 0.51
SSBP1-215ENST00000612337 SRCP12931 536 aa18.23■□□□□ 0.51
SSBP1-215ENST00000612337 PRKCSHP14314 528 aaPredicted RBP18.23■□□□□ 0.51
SSBP1-215ENST00000612337 HOXB3P14651 431 aaPredicted RBP18.23■□□□□ 0.51
SSBP1-215ENST00000612337 TFE3P19532 575 aaPredicted RBP18.23■□□□□ 0.51
SSBP1-215ENST00000612337 MAT2AP31153 395 aaKnown RBP18.23■□□□□ 0.51
SSBP1-215ENST00000612337 SCNN1AP37088 669 aa18.23■□□□□ 0.51
SSBP1-215ENST00000612337 SULT1E1P49888 294 aa18.23■□□□□ 0.51
SSBP1-215ENST00000612337 RNASE9P60153 205 aaKnown RBP18.23■□□□□ 0.51
SSBP1-215ENST00000612337 KRT83P78385 493 aa18.23■□□□□ 0.51
SSBP1-215ENST00000612337 OVGP1Q12889 678 aa18.23■□□□□ 0.51
SSBP1-215ENST00000612337 VWA3BQ502W6 1294 aa18.23■□□□□ 0.51
SSBP1-215ENST00000612337 ALFQ53S48 1182 aa18.23■□□□□ 0.51
SSBP1-215ENST00000612337 MIIPQ5JXC2 388 aa18.23■□□□□ 0.51
SSBP1-215ENST00000612337 C19orf48Q6RUI8 117 aa18.23■□□□□ 0.51
SSBP1-215ENST00000612337 SPATS2Q86XZ4 545 aaKnown RBP18.23■□□□□ 0.51
SSBP1-215ENST00000612337 ZNF683Q8IZ20 524 aa18.23■□□□□ 0.51
SSBP1-215ENST00000612337 PDCD7Q8N8D1 485 aaKnown RBP18.23■□□□□ 0.51
SSBP1-215ENST00000612337 C1orf74Q96LT6 269 aa18.23■□□□□ 0.51
SSBP1-215ENST00000612337 PSMB7Q99436 277 aa18.23■□□□□ 0.51
SSBP1-215ENST00000612337 C2orf49Q9BVC5 232 aaPredicted RBP18.23■□□□□ 0.51
SSBP1-215ENST00000612337 PDCL3Q9H2J4 239 aa18.23■□□□□ 0.51
SSBP1-215ENST00000612337 ARID1BQ8NFD5 2236 aaPredicted RBP18.23■□□□□ 0.51
SSBP1-215ENST00000612337 DRGXA6NNA5 263 aa18.22■□□□□ 0.51
SSBP1-215ENST00000612337 E9PAM4 449 aa18.22■□□□□ 0.51
SSBP1-215ENST00000612337 I6L893 689 aaPredicted RBP18.22■□□□□ 0.51
SSBP1-215ENST00000612337 CBX4O00257 560 aa18.22■□□□□ 0.51
SSBP1-215ENST00000612337 MT-CO1P00395 513 aa18.22■□□□□ 0.51
SSBP1-215ENST00000612337 F9P00740 461 aa18.22■□□□□ 0.51
SSBP1-215ENST00000612337 CYP11B1P15538 503 aa18.22■□□□□ 0.51
SSBP1-215ENST00000612337 CYP4F3Q08477 520 aa18.22■□□□□ 0.51
SSBP1-215ENST00000612337 DNAJC3Q13217 504 aa18.22■□□□□ 0.51
SSBP1-215ENST00000612337 RAPGEF1Q13905 1077 aa18.22■□□□□ 0.51
SSBP1-215ENST00000612337 DRAP1Q14919 205 aaPredicted RBP18.22■□□□□ 0.51
SSBP1-215ENST00000612337 SLC25A52Q3SY17 297 aa18.22■□□□□ 0.51
SSBP1-215ENST00000612337 POM121L1PQ3SYA9 428 aa18.22■□□□□ 0.51
SSBP1-215ENST00000612337 SETMARQ53H47 684 aaPredicted RBP18.22■□□□□ 0.51
SSBP1-215ENST00000612337 ACBD5Q5T8D3 534 aaPredicted RBP18.22■□□□□ 0.51
SSBP1-215ENST00000612337 SFMBT2Q5VUG0 894 aa18.22■□□□□ 0.51
SSBP1-215ENST00000612337 SETD3Q86TU7 594 aaPredicted RBP18.22■□□□□ 0.51
SSBP1-215ENST00000612337 EID2Q8N6I1 236 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms