RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 HMCESQ96FZ2 354 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 P2RY11Q96G91 374 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 SPATA13Q96N96 652 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 APOL5Q9BWW9 433 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 SLC46A2Q9BY10 475 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 FUT8Q9BYC5 575 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 SLC39A8Q9C0K1 460 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 EPHX3Q9H6B9 360 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 TMEM248Q9NWD8 314 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 ZDHHC7Q9NXF8 308 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 PAK5Q9P286 719 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 CFAP97Q9P2B7 532 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 PPARGC1AQ9UBK2 798 aaKnown RBP8.29□□□□□ -1.08
TARDBP-213ENST00000611963 ZNF212Q9UDV6 495 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 MTRF1LQ9UGC7 380 aaKnown RBP8.29□□□□□ -1.08
TARDBP-213ENST00000611963 TPX2Q9ULW0 747 aaKnown RBP8.29□□□□□ -1.08
TARDBP-213ENST00000611963 RAD54BQ9Y620 910 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 CLUHO75153 1309 aa8.29□□□□□ -1.08
TARDBP-213ENST00000611963 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.28□□□□□ -1.08
TARDBP-213ENST00000611963 C5orf60A6NFR6 353 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 RASA4BC9J798 803 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 GOLGA8MH3BSY2 632 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 LEFTY2O00292 366 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 MAP2K7O14733 419 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 RASA4O43374 803 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 GREM1O60565 184 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 GCATO75600 419 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 STK10O94804 968 aaKnown RBP8.28□□□□□ -1.08
TARDBP-213ENST00000611963 TMEM63AO94886 807 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 PRAMEF12O95522 483 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 METTL18O95568 372 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 FGF19O95750 216 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 C1RP00736 705 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 MX2P20592 715 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 PTPN3P26045 913 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 ACTN2P35609 894 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 HSPA9P38646 679 aaKnown RBP8.28□□□□□ -1.08
TARDBP-213ENST00000611963 PAPOLAP51003 745 aaKnown RBP8.28□□□□□ -1.08
TARDBP-213ENST00000611963 CAV1Q03135 178 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 DHX9Q08211 1270 aaKnown RBP8.28□□□□□ -1.08
TARDBP-213ENST00000611963 ZBTB17Q13105 803 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 MORF4L2Q15014 288 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 UAP1Q16222 522 aaPredicted RBP8.28□□□□□ -1.08
TARDBP-213ENST00000611963 ARHGAP15Q53QZ3 475 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 PRSS36Q5K4E3 855 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 RABGAP1LQ5R372 815 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 ANKRD20A2Q5SQ80 823 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 RARS2Q5T160 578 aaKnown RBP8.28□□□□□ -1.08
TARDBP-213ENST00000611963 ADGRF1Q5T601 910 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 ANKRD20A1Q5TYW2 823 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 ANKRD20A3Q5VUR7 823 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 SYCE2Q6PIF2 218 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 TMC5Q6UXY8 1006 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 TMEM184AQ6ZMB5 413 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 Q6ZNB5 142 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 ARHGEF18Q6ZSZ5 1173 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 TMC3Q7Z5M5 1100 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 PPIL6Q8IXY8 311 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 CCDC13Q8IYE1 715 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 ZNF567Q8N184 647 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 LZTR1Q8N653 840 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 BBOF1Q8ND07 529 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 RIN3Q8TB24 985 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 ITFG1Q8TB96 612 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 SH3RF2Q8TEC5 729 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 PRCCQ92733 491 aaPredicted RBP8.28□□□□□ -1.08
TARDBP-213ENST00000611963 AZIN2Q96A70 460 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 HDAC11Q96DB2 347 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 CDCA3Q99618 268 aaPredicted RBP8.28□□□□□ -1.08
TARDBP-213ENST00000611963 TXLNGYQ9BZA5 131 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 FAM129AQ9BZQ8 928 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 PIDD1Q9HB75 910 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 ETNK1Q9HBU6 452 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 C11orf16Q9NQ32 467 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 RAB6BQ9NRW1 208 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 CD207Q9UJ71 328 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 CDH22Q9UJ99 828 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 LSM7Q9UK45 103 aaKnown RBP8.28□□□□□ -1.08
TARDBP-213ENST00000611963 HPCAL4Q9UM19 191 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 SHOC2Q9UQ13 582 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 CCL26Q9Y258 94 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 ATP8A1Q9Y2Q0 1164 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 SH3BP1Q9Y3L3 701 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 PCDHB3Q9Y5E6 796 aa8.28□□□□□ -1.08
TARDBP-213ENST00000611963 ZFP37Q9Y6Q3 630 aaPredicted RBP8.28□□□□□ -1.08
TARDBP-213ENST00000611963 KIF26AQ9ULI4 1882 aaPredicted RBP8.28□□□□□ -1.08
TARDBP-213ENST00000611963 ARHGAP42A6NI28 874 aa8.27□□□□□ -1.09
TARDBP-213ENST00000611963 NCAM2O15394 837 aa8.27□□□□□ -1.09
TARDBP-213ENST00000611963 OPHN1O60890 802 aa8.27□□□□□ -1.09
TARDBP-213ENST00000611963 TBL1XO60907 577 aa8.27□□□□□ -1.09
TARDBP-213ENST00000611963 PPFIA2O75334 1257 aa8.27□□□□□ -1.09
TARDBP-213ENST00000611963 BANF1O75531 89 aa8.27□□□□□ -1.09
TARDBP-213ENST00000611963 LATS1O95835 1130 aa8.27□□□□□ -1.09
TARDBP-213ENST00000611963 JCHAINP01591 159 aa8.27□□□□□ -1.09
TARDBP-213ENST00000611963 POU2F2P09086 479 aa8.27□□□□□ -1.09
TARDBP-213ENST00000611963 DDX6P26196 483 aaKnown RBP eCLIP8.27□□□□□ -1.095e-34■□□□□ 10
TARDBP-213ENST00000611963 PSMB4P28070 264 aa8.27□□□□□ -1.09
TARDBP-213ENST00000611963 ACVRL1P37023 503 aa8.27□□□□□ -1.09
TARDBP-213ENST00000611963 HSD17B3P37058 310 aa8.27□□□□□ -1.09
TARDBP-213ENST00000611963 MAPKAPK2P49137 400 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms