RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 VPS51Q9UID3 782 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 ACTL7AQ9Y615 435 aa7.86□□□□□ -1.15
MSH6-211ENST00000606499 NUP205Q92621 2012 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 TBC1D3BA6NDS4 549 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 ARHGAP42A6NI28 874 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 K7EQS6 105 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 PDE2AO00408 941 aaPredicted RBP7.85□□□□□ -1.15
MSH6-211ENST00000606499 MAFKO60675 156 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 PRAMEF11O60813 436 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 ZMPSTE24O75844 475 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 URI1O94763 535 aaPredicted RBP7.85□□□□□ -1.15
MSH6-211ENST00000606499 PRLRP16471 622 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 POLR2EP19388 210 aaKnown RBP7.85□□□□□ -1.15
MSH6-211ENST00000606499 ETFBP38117 255 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 GARSP41250 739 aaKnown RBP7.85□□□□□ -1.15
MSH6-211ENST00000606499 GRIA2P42262 883 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 PLK1P53350 603 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 ARF5P84085 180 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 PRKCQQ04759 706 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 TMEM196Q5HYL7 178 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 EMC10Q5UCC4 262 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 EGFLAMQ63HQ2 1017 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 ZNF852Q6ZMS4 543 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 ZC3H18Q86VM9 953 aaKnown RBP7.85□□□□□ -1.15
MSH6-211ENST00000606499 CREG2Q8IUH2 290 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 CCNYQ8ND76 341 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 SPDYE1Q8NFV5 336 aaPredicted RBP7.85□□□□□ -1.15
MSH6-211ENST00000606499 WFIKKN2Q8TEU8 576 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 CYB5D2Q8WUJ1 264 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 C1orf54Q8WWF1 131 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 RPL10LQ96L21 214 aaKnown RBP7.85□□□□□ -1.15
MSH6-211ENST00000606499 QKIQ96PU8 341 aaKnown RBP eCLIP7.85□□□□□ -1.15
MSH6-211ENST00000606499 C2orf49Q9BVC5 232 aaPredicted RBP7.85□□□□□ -1.15
MSH6-211ENST00000606499 AP1M1Q9BXS5 423 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 FOXQ1Q9C009 403 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 C10orf88Q9H8K7 445 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 PRDM16Q9HAZ2 1276 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 SP110Q9HB58 689 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 PDFQ9HBH1 243 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 RBM12Q9NTZ6 932 aaKnown RBP7.85□□□□□ -1.15
MSH6-211ENST00000606499 ELOVL2Q9NXB9 296 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 IPO11Q9UI26 975 aaKnown RBP7.85□□□□□ -1.15
MSH6-211ENST00000606499 HCN2Q9UL51 889 aa7.85□□□□□ -1.15
MSH6-211ENST00000606499 TTC7AQ9ULT0 858 aaPredicted RBP7.85□□□□□ -1.15
MSH6-211ENST00000606499 MTF2Q9Y483 593 aaPredicted RBP7.85□□□□□ -1.15
MSH6-211ENST00000606499 H7C0C1 242 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 K7ERQ8 282 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 KCNK1O00180 336 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 MAN2B1O00754 1011 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 PPP1R12AO14974 1030 aaPredicted RBP7.84□□□□□ -1.15
MSH6-211ENST00000606499 MCF2LO15068 1137 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 SMAD6O43541 496 aaKnown RBP7.84□□□□□ -1.15
MSH6-211ENST00000606499 DCXO43602 365 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 KDELR3O43731 214 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 LIASO43766 372 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 RNF40O75150 1001 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 CD160O95971 181 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 PEX11BO96011 259 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 MT-CO1P00395 513 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 PDGFBP01127 241 aaPredicted RBP7.84□□□□□ -1.15
MSH6-211ENST00000606499 CHRM1P11229 460 aaPredicted RBP7.84□□□□□ -1.15
MSH6-211ENST00000606499 SRCP12931 536 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 VAV1P15498 845 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 MX2P20592 715 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 DRD1P21728 446 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 TARSP26639 723 aaKnown RBP7.84□□□□□ -1.15
MSH6-211ENST00000606499 ATP5OP48047 213 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 NR2C2P49116 596 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 NRLP54845 237 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 STARD6P59095 220 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 EIF3EP60228 445 aaKnown RBP7.84□□□□□ -1.15
MSH6-211ENST00000606499 ECT2LQ008S8 904 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 IL10RBQ08334 325 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 PPIDQ08752 370 aaKnown RBP7.84□□□□□ -1.15
MSH6-211ENST00000606499 AP1B1Q10567 949 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 GRSF1Q12849 480 aaKnown RBP eCLIP7.84□□□□□ -1.15
MSH6-211ENST00000606499 SNX1Q13596 522 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 CCINQ13939 588 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 DMC1Q14565 340 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 ZNF234Q14588 700 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 UBXN2BQ14CS0 331 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 EIF4HQ15056 248 aaKnown RBP7.84□□□□□ -1.15
MSH6-211ENST00000606499 PDK1Q15118 436 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 PRKD1Q15139 912 aaPredicted RBP7.84□□□□□ -1.15
MSH6-211ENST00000606499 PTPRNQ16849 979 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 KCTD19Q17RG1 926 aaPredicted RBP7.84□□□□□ -1.15
MSH6-211ENST00000606499 PREPLQ4J6C6 727 aaPredicted RBP7.84□□□□□ -1.15
MSH6-211ENST00000606499 C2orf27AQ580R0 203 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 TTC27Q6P3X3 843 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 Q6ZS52 159 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 SUGP1Q8IWZ8 645 aaKnown RBP7.84□□□□□ -1.15
MSH6-211ENST00000606499 ZNF687Q8N1G0 1237 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 ZNF366Q8N895 744 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 PRELID2Q8N945 189 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 KIF18AQ8NI77 898 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 ACTRT1Q8TDG2 376 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 EDAQ92838 391 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 TTC17Q96AE7 1141 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 HDAC11Q96DB2 347 aa7.84□□□□□ -1.15
MSH6-211ENST00000606499 MYO19Q96H55 970 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms