RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 C11orf74Q86VG3 221 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 TMEM139Q8IV31 216 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 ZNF366Q8N895 744 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 ACRBPQ8NEB7 543 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 GAB3Q8WWW8 586 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 PRCCQ92733 491 aaPredicted RBP16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 ARHGEF2Q92974 986 aaKnown RBP16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 CCDC114Q96M63 670 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 PSMB7Q99436 277 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 PRDM16Q9HAZ2 1276 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 NDFIP2Q9NV92 336 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 CWC15Q9P013 229 aaKnown RBP16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 RCOR3Q9P2K3 495 aaPredicted RBP16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 SLCO3A1Q9UIG8 710 aa16.39■□□□□ 0.21
PPFIA3-213ENST00000602905 NYNRINQ9P2P1 1898 aaKnown RBP16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 ZSCAN5CA6NGD5 496 aaPredicted RBP16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 ARHGAP42A6NI28 874 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 TTC34A8MYJ7 566 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 ARHGAP6O43182 974 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 LILRB5O75023 590 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 ZNF217O75362 1048 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 ERCC2P18074 760 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 NDUFV2P19404 249 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 CLCN6P51797 869 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 KIF5AQ12840 1032 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 SFSWAPQ12872 951 aaKnown RBP16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 DLG2Q15700 870 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 IFI16Q16666 785 aaKnown RBP16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 TXNRD3NBQ6F5E7 133 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 POLNQ7Z5Q5 900 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 TMPRSS6Q8IU80 811 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 UMODL1-AS1Q8N2C9 162 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 SH2D3CQ8N5H7 860 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 LZTR1Q8N653 840 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 SIPA1Q96FS4 1042 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 MYO19Q96H55 970 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 ACE2Q9BYF1 805 aaPredicted RBP16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 PCDH18Q9HCL0 1135 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 PRSS16Q9NQE7 514 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 HS3ST2Q9Y278 367 aa16.38■□□□□ 0.21
PPFIA3-213ENST00000602905 PLXND1Q9Y4D7 1925 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 THADAQ6YHU6 1953 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 CXorf51AA0A1B0GTR3 108 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 BTNL10A8MVZ5 291 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 RASA4BC9J798 803 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 RASA4O43374 803 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 KDELR3O43731 214 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 ATP9BO43861 1147 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 ACVRL1P37023 503 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 RECQLP46063 649 aaPredicted RBP16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 TAS2R40P59535 323 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 SIM2Q14190 667 aaPredicted RBP16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 ZNF776Q68DI1 518 aaPredicted RBP16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 TMCO3Q6UWJ1 677 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 PRR23BQ6ZRT6 265 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 DSG4Q86SJ6 1040 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 DAAM2Q86T65 1068 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 METTL3Q86U44 580 aaKnown RBP16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 RHOT1Q8IXI2 618 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 NKD2Q969F2 451 aaPredicted RBP16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 FAM122AQ96E09 287 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 MRGPRX1Q96LB2 322 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 CSPG4P5Q96PW8 444 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 CALN1Q9BXU9 219 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 DDX56Q9NY93 547 aaKnown RBP16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 TFR2Q9UP52 801 aa16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 REXO2Q9Y3B8 237 aaKnown RBP16.37■□□□□ 0.21
PPFIA3-213ENST00000602905 PJA2O43164 708 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 MAP3K13O43283 966 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 HRO43593 1189 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 BUB1O43683 1085 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 BUB1BO60566 1050 aaPredicted RBP16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 SIN3BO75182 1162 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 DNTTP04053 509 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 SRCP12931 536 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 TNNT1P13805 278 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 COMTP21964 271 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 AMPD1P23109 780 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 GLDCP23378 1020 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 SERPINB6P35237 376 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 DPYSQ14117 519 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 TTC31Q49AM3 519 aaPredicted RBP16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 LRRC38Q5VT99 294 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 C11orf63Q6NUN7 778 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 LINGO4Q6UY18 593 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 LRRC8AQ8IWT6 810 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 OR8D1Q8WZ84 308 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 DESI2Q9BSY9 194 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 TSGA10Q9BZW7 698 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 CD248Q9HCU0 757 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 SCML1Q9UN30 329 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 ALG6Q9Y672 507 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 CEP192Q8TEP8 1941 aa16.36■□□□□ 0.21
PPFIA3-213ENST00000602905 PROB1E7EW31 1015 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 BNIP3LO60238 219 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 ZMPSTE24O75844 475 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 RHOBTB1O94844 696 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 LMNAP02545 664 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 PTMAP06454 111 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms