RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 FAM83CQ9BQN1 747 aa5.14□□□□□ -1.59
SPTBN1-206ENST00000602898 SLC25A18Q9H1K4 315 aa5.14□□□□□ -1.59
SPTBN1-206ENST00000602898 SNX25Q9H3E2 840 aa5.14□□□□□ -1.59
SPTBN1-206ENST00000602898 FBRSL1Q9HCM7 1045 aaKnown RBP5.14□□□□□ -1.59
SPTBN1-206ENST00000602898 DCP1AQ9NPI6 582 aaPredicted RBP5.14□□□□□ -1.59
SPTBN1-206ENST00000602898 TMOD2Q9NZR1 351 aa5.14□□□□□ -1.59
SPTBN1-206ENST00000602898 CPNE7Q9UBL6 633 aa5.14□□□□□ -1.59
SPTBN1-206ENST00000602898 TMPRSS11EQ9UL52 423 aa5.14□□□□□ -1.59
SPTBN1-206ENST00000602898 PPP2R2CQ9Y2T4 447 aa5.14□□□□□ -1.59
SPTBN1-206ENST00000602898 ADAMTS7Q9UKP4 1686 aa5.14□□□□□ -1.59
SPTBN1-206ENST00000602898 GOLGA8JA6NMD2 632 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 OR5K4A6NMS3 321 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 GOLGA8SH3BPF8 625 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 GTPBP1O00178 669 aaKnown RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 TNPO2O14787 897 aaKnown RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 PIP5K1BO14986 540 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 PGRMC2O15173 223 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 ULK1O75385 1050 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 DGAT1O75907 488 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 ATP5HO75947 161 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 AKR7A3O95154 331 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 RB1P06400 928 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 CYC1P08574 325 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 KITP10721 976 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 MYF5P13349 255 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 CALB2P22676 271 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 HARS2P49590 506 aaKnown RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 NME5P56597 212 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 ATP11AP98196 1134 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 CEBPZQ03701 1054 aaKnown RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 NTRK3Q16288 839 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 SMTNL2Q2TAL5 461 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 Q3ZCU0 254 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 FAXCQ5TGI0 409 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 SNRNP48Q6IEG0 339 aaKnown RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 ADAMTSL4Q6UY14 1074 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 Q6ZNX1 250 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 TMTC3Q6ZXV5 915 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 C16orf59Q7L2K0 433 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 MAEAQ7L5Y9 396 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 UBE3BQ7Z3V4 1068 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 CROCCP3Q8IVE0 287 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 CNTN4Q8IWV2 1026 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 DDHD1Q8NEL9 900 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 KCNE4Q8WWG9 221 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 MAGEB10Q96LZ2 347 aaPredicted RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 CRNKL1Q9BZJ0 848 aaKnown RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 RNF32Q9H0A6 362 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 SEMA6BQ9H3T3 888 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 XKR8Q9H6D3 395 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 COQ10BQ9H8M1 238 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 RXFP3Q9NSD7 469 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 SMPD3Q9NY59 655 aaPredicted RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 TRPM5Q9NZQ8 1165 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 TRIM10Q9UDY6 481 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 DNAJC16Q9Y2G8 782 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 SERTM2A0A1B0GWG4 89 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 ARHGEF37A1IGU5 675 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 MAGEB16A2A368 324 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 RBAK-RBAKDNI3L0D1 243 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 L7N2F9 121 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 AGRPO00253 132 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 CBX4O00257 560 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 PLA2G6O60733 806 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 NDUFS2O75306 463 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 CILPO75339 1184 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 ENTPD3O75355 529 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 CRYZL1O95825 349 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 QDPRP09417 244 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 SPATA31D3P0C874 917 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 ANXA8P13928 327 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 CPA1P15085 419 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 NQO1P15559 274 aaKnown RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 GALP22466 123 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 MDH1P40925 334 aaKnown RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 CACNA2D1P54289 1103 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 PNLIPRP1P54315 467 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 GMFBP60983 142 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 LACTBP83111 547 aaPredicted RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 XIAPP98170 497 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 CSTF3Q12996 717 aaKnown RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 PTPAQ15257 358 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 GRIK4Q16099 956 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 STX1AQ16623 288 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 GSTA3Q16772 222 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 AOC3Q16853 763 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 SMU1Q2TAY7 513 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 ANXA8L1Q5VT79 327 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 OVOS1Q6IE37 1185 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 SPATA31D4Q6ZUB0 917 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 C11orf57Q6ZUT1 292 aaPredicted RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 RFPL4BQ6ZWI9 263 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 UBE2R2Q712K3 238 aaPredicted RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 PATL1Q86TB9 770 aaKnown RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 CUZD1Q86UP6 607 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 SCYL3Q8IZE3 742 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 IFI44Q8TCB0 444 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 CCDC12Q8WUD4 166 aaPredicted RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 HDAC10Q969S8 669 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms