RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 DSG4Q86SJ6 1040 aa18.17■□□□□ 0.5
SSBP4-207ENST00000600244 KLK6Q92876 244 aa18.17■□□□□ 0.5
SSBP4-207ENST00000600244 RPL10LQ96L21 214 aaKnown RBP18.17■□□□□ 0.5
SSBP4-207ENST00000600244 PRICKLE1Q96MT3 831 aaPredicted RBP18.17■□□□□ 0.5
SSBP4-207ENST00000600244 SPAG5Q96R06 1193 aa18.17■□□□□ 0.5
SSBP4-207ENST00000600244 SEPT10Q9P0V9 454 aa18.17■□□□□ 0.5
SSBP4-207ENST00000600244 TPP1O14773 563 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 MSI1O43347 362 aaKnown RBP18.16■□□□□ 0.5
SSBP4-207ENST00000600244 ZBED1O96006 694 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 IGLV3-27P01718 113 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 NME1P15531 152 aaKnown RBP18.16■□□□□ 0.5
SSBP4-207ENST00000600244 TXLNAP40222 546 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 CD97P48960 835 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 CLDN2P57739 230 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 RPS24P62847 133 aaKnown RBP18.16■□□□□ 0.5
SSBP4-207ENST00000600244 C1QBPQ07021 282 aaKnown RBP18.16■□□□□ 0.5
SSBP4-207ENST00000600244 KCNAB2Q13303 367 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 ZNF284Q2VY69 593 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 ZACNQ401N2 412 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 NEK5Q6P3R8 708 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 B3GNT8Q7Z7M8 397 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 DTX1Q86Y01 620 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 DCP2Q8IU60 420 aaKnown RBP18.16■□□□□ 0.5
SSBP4-207ENST00000600244 C12orf56Q8IXR9 622 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 HJURPQ8NCD3 748 aaPredicted RBP18.16■□□□□ 0.5
SSBP4-207ENST00000600244 FRS2Q8WU20 508 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 MIB2Q96AX9 1013 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 BOCQ9BWV1 1114 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 FZD3Q9NPG1 666 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 PPM1HQ9ULR3 514 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 LRBAP50851 2863 aa18.16■□□□□ 0.5
SSBP4-207ENST00000600244 LRRK1Q38SD2 2015 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 A0A1W2PQU0 124 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 MUSKO15146 869 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 ACSL4O60488 711 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 HGFP14210 728 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 HNRNPA2B1P22626 353 aaKnown RBP18.15■□□□□ 0.5
SSBP4-207ENST00000600244 AKT2P31751 481 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 STK19P49842 368 aaPredicted RBP18.15■□□□□ 0.5
SSBP4-207ENST00000600244 TKTL1P51854 596 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 SPIDRQ14159 915 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 FZD2Q14332 565 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 FAM46CQ5VWP2 391 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 BSPRYQ5W0U4 402 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 NADSYN1Q6IA69 706 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 CCDC73Q6ZRK6 1079 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 Q6ZSR6 202 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 APCDD1Q8J025 514 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 CARNMT1Q8N4J0 409 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 RNF139Q8WU17 664 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 AZIN2Q96A70 460 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 BMFQ96LC9 184 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 CCDC3Q9BQI4 270 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 SLC12A9Q9BXP2 914 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 ULBP1Q9BZM6 244 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 FAM13BQ9NYF5 915 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 KLF15Q9UIH9 416 aa18.15■□□□□ 0.5
SSBP4-207ENST00000600244 SCN8AQ9UQD0 1980 aa18.14■□□□□ 0.49
SSBP4-207ENST00000600244 A0A1B0GVL5 298 aa18.14■□□□□ 0.49
SSBP4-207ENST00000600244 GADD45BO75293 160 aaPredicted RBP18.14■□□□□ 0.49
SSBP4-207ENST00000600244 PFKFB1P16118 471 aa18.14■□□□□ 0.49
SSBP4-207ENST00000600244 SLC11A2P49281 568 aa18.14■□□□□ 0.49
SSBP4-207ENST00000600244 POLE2P56282 527 aa18.14■□□□□ 0.49
SSBP4-207ENST00000600244 DEFB133Q30KQ1 61 aa18.14■□□□□ 0.49
SSBP4-207ENST00000600244 RNF219Q5W0B1 726 aaPredicted RBP18.14■□□□□ 0.49
SSBP4-207ENST00000600244 BORAQ6PGQ7 559 aa18.14■□□□□ 0.49
SSBP4-207ENST00000600244 SLC35F3Q8IY50 421 aa18.14■□□□□ 0.49
SSBP4-207ENST00000600244 SPATA20Q8TB22 786 aa18.14■□□□□ 0.49
SSBP4-207ENST00000600244 FAM174AQ8TBP5 190 aa18.14■□□□□ 0.49
SSBP4-207ENST00000600244 EDEM1Q92611 657 aa18.14■□□□□ 0.49
SSBP4-207ENST00000600244 NAT6Q93015 286 aa18.14■□□□□ 0.49
SSBP4-207ENST00000600244 GBP4Q96PP9 640 aa18.14■□□□□ 0.49
SSBP4-207ENST00000600244 GOLPH3LQ9H4A5 285 aa18.14■□□□□ 0.49
SSBP4-207ENST00000600244 CYP3A43Q9HB55 503 aa18.14■□□□□ 0.49
SSBP4-207ENST00000600244 EPB41L5Q9HCM4 733 aa18.14■□□□□ 0.49
SSBP4-207ENST00000600244 AQP9O43315 295 aa18.13■□□□□ 0.49
SSBP4-207ENST00000600244 DLG4P78352 724 aa18.13■□□□□ 0.49
SSBP4-207ENST00000600244 CDH18Q13634 790 aa18.13■□□□□ 0.49
SSBP4-207ENST00000600244 PIP5KL1Q5T9C9 394 aa18.13■□□□□ 0.49
SSBP4-207ENST00000600244 SV2AQ7L0J3 742 aa18.13■□□□□ 0.49
SSBP4-207ENST00000600244 HORMAD1Q86X24 394 aa18.13■□□□□ 0.49
SSBP4-207ENST00000600244 ZFAND4Q86XD8 727 aa18.13■□□□□ 0.49
SSBP4-207ENST00000600244 UNC45BQ8IWX7 931 aa18.13■□□□□ 0.49
SSBP4-207ENST00000600244 OR8D1Q8WZ84 308 aa18.13■□□□□ 0.49
SSBP4-207ENST00000600244 PANK2Q9BZ23 570 aa18.13■□□□□ 0.49
SSBP4-207ENST00000600244 HS3ST3A1Q9Y663 406 aa18.13■□□□□ 0.49
SSBP4-207ENST00000600244 SPTY2D1-AS1A0A0U1RR47 76 aa18.12■□□□□ 0.49
SSBP4-207ENST00000600244 A6NNZ2 444 aa18.12■□□□□ 0.49
SSBP4-207ENST00000600244 YJEFN3A6XGL0 299 aa18.12■□□□□ 0.49
SSBP4-207ENST00000600244 E7ENQ6 273 aa18.12■□□□□ 0.49
SSBP4-207ENST00000600244 TMX2-CTNND1H3BSU7 103 aa18.12■□□□□ 0.49
SSBP4-207ENST00000600244 POLR2DO15514 142 aaKnown RBP18.12■□□□□ 0.49
SSBP4-207ENST00000600244 EXOC3O60645 756 aa18.12■□□□□ 0.49
SSBP4-207ENST00000600244 MOCS3O95396 460 aa18.12■□□□□ 0.49
SSBP4-207ENST00000600244 NNMTP40261 264 aa18.12■□□□□ 0.49
SSBP4-207ENST00000600244 RPIAP49247 311 aa18.12■□□□□ 0.49
SSBP4-207ENST00000600244 NDUFA8P51970 172 aa18.12■□□□□ 0.49
SSBP4-207ENST00000600244 OR6B2Q6IFH4 312 aa18.12■□□□□ 0.49
SSBP4-207ENST00000600244 MSANTD2Q6P1R3 559 aa18.12■□□□□ 0.49
SSBP4-207ENST00000600244 NELFCDQ8IXH7 590 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms