RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 SCUBE2Q9NQ36 999 aa19.42■□□□□ 0.7
FARP1-229ENST00000600190 SLC12A6Q9UHW9 1150 aa19.42■□□□□ 0.7
FARP1-229ENST00000600190 CYTH4Q9UIA0 394 aa19.42■□□□□ 0.7
FARP1-229ENST00000600190 SYNJ2BP-COX16A0A087WUM0 186 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 A0A1W2PR77 199 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 KCNU1A8MYU2 1149 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 MZF1P28698 734 aaPredicted RBP19.41■□□□□ 0.7
FARP1-229ENST00000600190 KLK7P49862 253 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 PITX1P78337 314 aaPredicted RBP19.41■□□□□ 0.7
FARP1-229ENST00000600190 DNAJC3Q13217 504 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 ELAVL3Q14576 367 aaKnown RBP19.41■□□□□ 0.7
FARP1-229ENST00000600190 SHBQ15464 509 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 TAF5Q15542 800 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 SLC45A4Q5BKX6 768 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 TMEM110Q86TL2 294 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 TMPRSS12Q86WS5 348 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 CCAR2Q8N163 923 aaKnown RBP19.41■□□□□ 0.7
FARP1-229ENST00000600190 EID2Q8N6I1 236 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 ATP6V0D2Q8N8Y2 350 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 NAA15Q9BXJ9 866 aaKnown RBP19.41■□□□□ 0.7
FARP1-229ENST00000600190 GANQ9H2C0 597 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 FAM204AQ9H8W3 233 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 ACP6Q9NPH0 428 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.41■□□□□ 0.7
FARP1-229ENST00000600190 COX16Q9P0S2 106 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 IFNKQ9P0W0 207 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 BPTFQ12830 3046 aa19.41■□□□□ 0.7
FARP1-229ENST00000600190 FASNP49327 2511 aaKnown RBP19.41■□□□□ 0.7
FARP1-229ENST00000600190 TLR4O00206 839 aa19.4■□□□□ 0.7
FARP1-229ENST00000600190 PLK4O00444 970 aa19.4■□□□□ 0.7
FARP1-229ENST00000600190 IGLV3-25P01717 112 aa19.4■□□□□ 0.7
FARP1-229ENST00000600190 JUPP14923 745 aa19.4■□□□□ 0.7
FARP1-229ENST00000600190 CLCN1P35523 988 aa19.4■□□□□ 0.7
FARP1-229ENST00000600190 SOX5P35711 763 aa19.4■□□□□ 0.7
FARP1-229ENST00000600190 ARRB1P49407 418 aaPredicted RBP19.4■□□□□ 0.7
FARP1-229ENST00000600190 CLDN6P56747 220 aa19.4■□□□□ 0.7
FARP1-229ENST00000600190 SULT2A1Q06520 285 aa19.4■□□□□ 0.7
FARP1-229ENST00000600190 SLC12A1Q13621 1099 aa19.4■□□□□ 0.7
FARP1-229ENST00000600190 ACCSLQ4AC99 568 aa19.4■□□□□ 0.7
FARP1-229ENST00000600190 ZNF677Q86XU0 584 aa19.4■□□□□ 0.7
FARP1-229ENST00000600190 RNF34Q969K3 372 aa19.4■□□□□ 0.7
FARP1-229ENST00000600190 PCDHGA1Q9Y5H4 931 aa19.4■□□□□ 0.7
FARP1-229ENST00000600190 URB1O60287 2271 aaKnown RBP19.4■□□□□ 0.7
FARP1-229ENST00000600190 NYNRINQ9P2P1 1898 aaKnown RBP19.39■□□□□ 0.7
FARP1-229ENST00000600190 F8VZ95 297 aa19.39■□□□□ 0.69
FARP1-229ENST00000600190 GFPT2O94808 682 aa19.39■□□□□ 0.69
FARP1-229ENST00000600190 MAT2AP31153 395 aaKnown RBP19.39■□□□□ 0.69
FARP1-229ENST00000600190 DRD3P35462 400 aa19.39■□□□□ 0.69
FARP1-229ENST00000600190 METAP1P53582 386 aa19.39■□□□□ 0.69
FARP1-229ENST00000600190 PPP2CBP62714 309 aa19.39■□□□□ 0.69
FARP1-229ENST00000600190 PPP2CAP67775 309 aa19.39■□□□□ 0.69
FARP1-229ENST00000600190 BNIP3Q12983 259 aa19.39■□□□□ 0.69
FARP1-229ENST00000600190 PDCLQ13371 301 aa19.39■□□□□ 0.69
FARP1-229ENST00000600190 RABGAP1LQ5R372 815 aa19.39■□□□□ 0.69
FARP1-229ENST00000600190 PRPF39Q86UA1 669 aaKnown RBP19.39■□□□□ 0.69
FARP1-229ENST00000600190 MSANTD4Q8NCY6 345 aa19.39■□□□□ 0.69
FARP1-229ENST00000600190 DCBLD2Q96PD2 775 aa19.39■□□□□ 0.69
FARP1-229ENST00000600190 PRMT1Q99873 361 aaKnown RBP19.39■□□□□ 0.69
FARP1-229ENST00000600190 EDEM3Q9BZQ6 932 aa19.39■□□□□ 0.69
FARP1-229ENST00000600190 TPX2Q9ULW0 747 aaKnown RBP19.39■□□□□ 0.69
FARP1-229ENST00000600190 MYO6Q9UM54 1294 aa19.39■□□□□ 0.69
FARP1-229ENST00000600190 PCDHGC3Q9UN70 934 aa19.39■□□□□ 0.69
FARP1-229ENST00000600190 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.39■□□□□ 0.69
FARP1-229ENST00000600190 COL5A1P20908 1838 aaPredicted RBP19.39■□□□□ 0.69
FARP1-229ENST00000600190 C10orf142B7Z368 130 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 YKT6O15498 198 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 RTN2O75298 545 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 RFPL3O75679 317 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 TPM1P09493 284 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 SLC2A3P11169 496 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 CYP11B1P15538 503 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 FERP16591 822 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 EPHA8P29322 1005 aaPredicted RBP19.38■□□□□ 0.69
FARP1-229ENST00000600190 CCR1P32246 355 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 HNF1BP35680 557 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 NXPH1P58417 271 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 CDK17Q00537 523 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 EIF4EBP2Q13542 120 aaPredicted RBP19.38■□□□□ 0.69
FARP1-229ENST00000600190 TTC39BQ5VTQ0 682 aaPredicted RBP19.38■□□□□ 0.69
FARP1-229ENST00000600190 DPY19L2P1Q6NXN4 242 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 SLC47A2Q86VL8 602 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 DEFB106AQ8N104 65 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 TMEM35BQ8NCS4 154 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 FRS2Q8WU20 508 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 RPRD1AQ96P16 312 aaPredicted RBP19.38■□□□□ 0.69
FARP1-229ENST00000600190 SYNCQ9H7C4 482 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 DDIT4Q9NX09 232 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 AJAP1Q9UKB5 411 aaPredicted RBP19.38■□□□□ 0.69
FARP1-229ENST00000600190 SARDHQ9UL12 918 aa19.38■□□□□ 0.69
FARP1-229ENST00000600190 A0A1B0GVM2 712 aa19.37■□□□□ 0.69
FARP1-229ENST00000600190 TCAF2A6NFQ2 919 aa19.37■□□□□ 0.69
FARP1-229ENST00000600190 E9PAM4 449 aa19.37■□□□□ 0.69
FARP1-229ENST00000600190 LATO43561 262 aa19.37■□□□□ 0.69
FARP1-229ENST00000600190 C1SP09871 688 aa19.37■□□□□ 0.69
FARP1-229ENST00000600190 CDK4P11802 303 aa19.37■□□□□ 0.69
FARP1-229ENST00000600190 PLK1P53350 603 aa19.37■□□□□ 0.69
FARP1-229ENST00000600190 OXCT1P55809 520 aa19.37■□□□□ 0.69
FARP1-229ENST00000600190 CENPCQ03188 943 aa19.37■□□□□ 0.69
FARP1-229ENST00000600190 POM121L1PQ3SYA9 428 aa19.37■□□□□ 0.69
FARP1-229ENST00000600190 C6orf118Q5T5N4 469 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms