RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 GGCXP38435 758 aa16.36■□□□□ 0.21
LINC02560-201ENST00000596379 TARDBPQ13148 414 aaKnown RBP eCLIP16.36■□□□□ 0.21
LINC02560-201ENST00000596379 C6orf118Q5T5N4 469 aa16.36■□□□□ 0.21
LINC02560-201ENST00000596379 AGBL4Q5VU57 503 aa16.36■□□□□ 0.21
LINC02560-201ENST00000596379 SFMBT2Q5VUG0 894 aa16.36■□□□□ 0.21
LINC02560-201ENST00000596379 GBP6Q6ZN66 633 aa16.36■□□□□ 0.21
LINC02560-201ENST00000596379 C11orf57Q6ZUT1 292 aaPredicted RBP16.36■□□□□ 0.21
LINC02560-201ENST00000596379 Q6ZVU0 165 aa16.36■□□□□ 0.21
LINC02560-201ENST00000596379 KANSL1Q7Z3B3 1105 aa16.36■□□□□ 0.21
LINC02560-201ENST00000596379 IQCHQ86VS3 1027 aa16.36■□□□□ 0.21
LINC02560-201ENST00000596379 TRIM69Q86WT6 500 aa16.36■□□□□ 0.21
LINC02560-201ENST00000596379 SHC3Q92529 594 aa16.36■□□□□ 0.21
LINC02560-201ENST00000596379 BBC3Q96PG8 261 aaPredicted RBP16.36■□□□□ 0.21
LINC02560-201ENST00000596379 SIK2Q9H0K1 926 aa16.36■□□□□ 0.21
LINC02560-201ENST00000596379 APEX2Q9UBZ4 518 aa16.36■□□□□ 0.21
LINC02560-201ENST00000596379 VPS28Q9UK41 221 aa16.36■□□□□ 0.21
LINC02560-201ENST00000596379 DMTF1Q9Y222 760 aa16.36■□□□□ 0.21
LINC02560-201ENST00000596379 CA5BQ9Y2D0 317 aa16.36■□□□□ 0.21
LINC02560-201ENST00000596379 IGSF10Q6WRI0 2623 aa16.36■□□□□ 0.21
LINC02560-201ENST00000596379 TDRD6O60522 2096 aaKnown RBP16.35■□□□□ 0.21
LINC02560-201ENST00000596379 C1QTNF3-AMACRE9PGA6 284 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 M0QYT0 321 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 ALOX15BO15296 676 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 MAGEC1O60732 1142 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 CLDN11O75508 207 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 ERBB2P04626 1255 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 NUDT1P36639 197 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 SLC6A3Q01959 620 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 PTK2Q05397 1052 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 OVGP1Q12889 678 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 MTA1Q13330 715 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 SETMARQ53H47 684 aaPredicted RBP16.35■□□□□ 0.21
LINC02560-201ENST00000596379 HES3Q5TGS1 186 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 FBXL19Q6PCT2 694 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 OLFML1Q6UWY5 402 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 SH2D3CQ8N5H7 860 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 C1orf131Q8NDD1 294 aaKnown RBP16.35■□□□□ 0.21
LINC02560-201ENST00000596379 NXPE2Q96DL1 559 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 NOX5Q96PH1 765 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 MUC3BQ9H195 1237 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 RWDD2AQ9UIY3 292 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 TBC1D30Q9Y2I9 924 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 AK5Q9Y6K8 562 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 SHROOM3Q8TF72 1996 aa16.35■□□□□ 0.21
LINC02560-201ENST00000596379 PRAMEF26H0Y7S4 382 aa16.34■□□□□ 0.21
LINC02560-201ENST00000596379 SDC3O75056 442 aa16.34■□□□□ 0.21
LINC02560-201ENST00000596379 DAB1O75553 588 aa16.34■□□□□ 0.21
LINC02560-201ENST00000596379 CNTN5O94779 1100 aa16.34■□□□□ 0.21
LINC02560-201ENST00000596379 MT-CO1P00395 513 aa16.34■□□□□ 0.21
LINC02560-201ENST00000596379 CKMT2P17540 419 aa16.34■□□□□ 0.21
LINC02560-201ENST00000596379 PON1P27169 355 aa16.34■□□□□ 0.21
LINC02560-201ENST00000596379 NOS2P35228 1153 aa16.34■□□□□ 0.21
LINC02560-201ENST00000596379 CDH4P55283 916 aa16.34■□□□□ 0.21
LINC02560-201ENST00000596379 TAS2R38P59533 333 aa16.34■□□□□ 0.21
LINC02560-201ENST00000596379 SEMG2Q02383 582 aa16.34■□□□□ 0.21
LINC02560-201ENST00000596379 EXOC3L4Q17RC7 722 aa16.34■□□□□ 0.21
LINC02560-201ENST00000596379 C5orf22Q49AR2 442 aa16.34■□□□□ 0.21
LINC02560-201ENST00000596379 KLHDC7BQ96G42 594 aa16.34■□□□□ 0.21
LINC02560-201ENST00000596379 SYNCQ9H7C4 482 aa16.34■□□□□ 0.21
LINC02560-201ENST00000596379 SNAP91O60641 907 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 RNGTTO60942 597 aaKnown RBP16.33■□□□□ 0.2
LINC02560-201ENST00000596379 ADCY5O95622 1261 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 CTSLP07711 333 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 SRCP12931 536 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 ITPKBP27987 946 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 CLCN1P35523 988 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 KRT9P35527 623 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 SNX16P57768 344 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 KRT83P78385 493 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 ILKQ13418 452 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 PTPN20Q4JDL3 420 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 ALFQ53S48 1182 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 PIP5KL1Q5T9C9 394 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 SLC26A9Q7LBE3 791 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 KLK6Q92876 244 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 PSMB7Q99436 277 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 WDCPQ9H6R7 721 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 PREBQ9HCU5 417 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 PLCB1Q9NQ66 1216 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 ANLNQ9NQW6 1124 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 PIGVQ9NUD9 493 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 DNAJC12Q9UKB3 198 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 AJAP1Q9UKB5 411 aaPredicted RBP16.33■□□□□ 0.2
LINC02560-201ENST00000596379 HS3ST2Q9Y278 367 aa16.33■□□□□ 0.2
LINC02560-201ENST00000596379 A0A1W2PQU0 124 aa16.32■□□□□ 0.2
LINC02560-201ENST00000596379 K7ERQ8 282 aa16.32■□□□□ 0.2
LINC02560-201ENST00000596379 FOXN3O00409 490 aaPredicted RBP16.32■□□□□ 0.2
LINC02560-201ENST00000596379 KPNA3O00505 521 aaPredicted RBP16.32■□□□□ 0.2
LINC02560-201ENST00000596379 TRIM38O00635 465 aa16.32■□□□□ 0.2
LINC02560-201ENST00000596379 SLC31A1O15431 190 aa16.32■□□□□ 0.2
LINC02560-201ENST00000596379 TLX3O43711 291 aaPredicted RBP16.32■□□□□ 0.2
LINC02560-201ENST00000596379 RHOCP08134 193 aa16.32■□□□□ 0.2
LINC02560-201ENST00000596379 PRLRP16471 622 aa16.32■□□□□ 0.2
LINC02560-201ENST00000596379 TFE3P19532 575 aaPredicted RBP16.32■□□□□ 0.2
LINC02560-201ENST00000596379 CHRNA3P32297 505 aa16.32■□□□□ 0.2
LINC02560-201ENST00000596379 ABCG1P45844 678 aa16.32■□□□□ 0.2
LINC02560-201ENST00000596379 RNASE9P60153 205 aaKnown RBP16.32■□□□□ 0.2
LINC02560-201ENST00000596379 PROX2Q3B8N5 592 aa16.32■□□□□ 0.2
LINC02560-201ENST00000596379 OTUD1Q5VV17 481 aaPredicted RBP16.32■□□□□ 0.2
LINC02560-201ENST00000596379 SLC47A2Q86VL8 602 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms