RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 TBC1D3EA0A087X179 549 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 TBC1D3KA0A087X1G2 549 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 A0A0D9SEW6 157 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 TBC1D3FA6NER0 549 aaPredicted RBP24.07■■□□□ 1.44
LSM4-204ENST00000594828 TBC1D3LB9A6J9 549 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 MCF2LO15068 1137 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 BNIP3LO60238 219 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 SNAP91O60641 907 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 TRIM16O95361 564 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 MT-CO1P00395 513 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 TBC1D3HP0C7X1 549 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 SRCP12931 536 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 SDC4P31431 198 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 DRD3P35462 400 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 CCR5P51681 352 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 TBC1D3GQ6DHY5 549 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 TBC1D3CQ6IPX1 549 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 LAYNQ6UX15 382 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 Q6ZVU0 165 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 TBC1D3Q8IZP1 549 aaPredicted RBP24.07■■□□□ 1.44
LSM4-204ENST00000594828 ATP11CQ8NB49 1132 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 HSD3B7Q9H2F3 369 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 EBF2Q9HAK2 575 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 VPS51Q9UID3 782 aa24.07■■□□□ 1.44
LSM4-204ENST00000594828 TPRP12270 2363 aaKnown RBP24.06■■□□□ 1.44
LSM4-204ENST00000594828 C1QTNF3-AMACRE9PGA6 284 aa24.06■■□□□ 1.44
LSM4-204ENST00000594828 KCNK3O14649 394 aa24.06■■□□□ 1.44
LSM4-204ENST00000594828 ALOX15BO15296 676 aa24.06■■□□□ 1.44
LSM4-204ENST00000594828 HYAL3O43820 417 aaPredicted RBP24.06■■□□□ 1.44
LSM4-204ENST00000594828 NSFP46459 744 aaKnown RBP24.06■■□□□ 1.44
LSM4-204ENST00000594828 METAP1P53582 386 aa24.06■■□□□ 1.44
LSM4-204ENST00000594828 C21orf59P57076 290 aa24.06■■□□□ 1.44
LSM4-204ENST00000594828 TYRO3Q06418 890 aa24.06■■□□□ 1.44
LSM4-204ENST00000594828 SUZ12Q15022 739 aaKnown RBP24.06■■□□□ 1.44
LSM4-204ENST00000594828 CDO1Q16878 200 aa24.06■■□□□ 1.44
LSM4-204ENST00000594828 C15orf59Q2T9L4 293 aaPredicted RBP24.06■■□□□ 1.44
LSM4-204ENST00000594828 ARL13BQ3SXY8 428 aa24.06■■□□□ 1.44
LSM4-204ENST00000594828 CCDC14Q49A88 953 aa24.06■■□□□ 1.44
LSM4-204ENST00000594828 ARTNQ5T4W7 220 aa24.06■■□□□ 1.44
LSM4-204ENST00000594828 DBX2Q6ZNG2 339 aa24.06■■□□□ 1.44
LSM4-204ENST00000594828 APTXQ7Z2E3 356 aaKnown RBP24.06■■□□□ 1.44
LSM4-204ENST00000594828 SKA1Q96BD8 255 aa24.06■■□□□ 1.44
LSM4-204ENST00000594828 SLC6A18Q96N87 628 aa24.06■■□□□ 1.44
LSM4-204ENST00000594828 ACE2Q9BYF1 805 aaPredicted RBP24.06■■□□□ 1.44
LSM4-204ENST00000594828 ZYG11BQ9C0D3 744 aa24.06■■□□□ 1.44
LSM4-204ENST00000594828 NAT10Q9H0A0 1025 aaKnown RBP24.06■■□□□ 1.44
LSM4-204ENST00000594828 ADAM22Q9P0K1 906 aa24.06■■□□□ 1.44
LSM4-204ENST00000594828 PCOLCE2Q9UKZ9 415 aa24.06■■□□□ 1.44
LSM4-204ENST00000594828 TPX2Q9ULW0 747 aaKnown RBP24.06■■□□□ 1.44
LSM4-204ENST00000594828 FARP1Q9Y4F1 1045 aaPredicted RBP24.06■■□□□ 1.44
LSM4-204ENST00000594828 ILVBLA1L0T0 632 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 C2CD4BA6NLJ0 364 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 C10orf142B7Z368 130 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 PLK4O00444 970 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 VILLO15195 856 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 CBFA2T3O75081 653 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 ADRA1BP35368 520 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 PTP4A2Q12974 167 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 CLEC16AQ2KHT3 1053 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 ZNF423Q2M1K9 1284 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 RAB6CQ53S08 254 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 KCNT1Q5JUK3 1230 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 AOPEPQ8N6M6 819 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 DCAF4L2Q8NA75 395 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 JOSD2Q8TAC2 188 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 PIP4K2CQ8TBX8 421 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 FAM131CQ96AQ9 280 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 RAB6CQ9H0N0 254 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 KDM4CQ9H3R0 1056 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 PPARGC1AQ9UBK2 798 aaKnown RBP24.05■■□□□ 1.44
LSM4-204ENST00000594828 ACACBO00763 2458 aa24.05■■□□□ 1.44
LSM4-204ENST00000594828 NYNRINQ9P2P1 1898 aaKnown RBP24.04■■□□□ 1.44
LSM4-204ENST00000594828 K7ERQ8 282 aa24.04■■□□□ 1.44
LSM4-204ENST00000594828 SLC7A4O43246 635 aa24.04■■□□□ 1.44
LSM4-204ENST00000594828 RTN2O75298 545 aa24.04■■□□□ 1.44
LSM4-204ENST00000594828 GJB6O95452 261 aa24.04■■□□□ 1.44
LSM4-204ENST00000594828 KRT3P12035 628 aa24.04■■□□□ 1.44
LSM4-204ENST00000594828 CTSKP43235 329 aa24.04■■□□□ 1.44
LSM4-204ENST00000594828 CNTN1Q12860 1018 aa24.04■■□□□ 1.44
LSM4-204ENST00000594828 POM121L1PQ3SYA9 428 aa24.04■■□□□ 1.44
LSM4-204ENST00000594828 ZNF783Q6ZMS7 281 aa24.04■■□□□ 1.44
LSM4-204ENST00000594828 PHF13Q86YI8 300 aaPredicted RBP24.04■■□□□ 1.44
LSM4-204ENST00000594828 OR7D4Q8NG98 312 aa24.04■■□□□ 1.44
LSM4-204ENST00000594828 RHBDD1Q8TEB9 315 aa24.04■■□□□ 1.44
LSM4-204ENST00000594828 CCDC114Q96M63 670 aa24.04■■□□□ 1.44
LSM4-204ENST00000594828 SPON2Q9BUD6 331 aa24.04■■□□□ 1.44
LSM4-204ENST00000594828 AASDHPPTQ9NRN7 309 aa24.04■■□□□ 1.44
LSM4-204ENST00000594828 SEPT11Q9NVA2 429 aaKnown RBP24.04■■□□□ 1.44
LSM4-204ENST00000594828 TMEM63CQ9P1W3 806 aa24.04■■□□□ 1.44
LSM4-204ENST00000594828 ZNF212Q9UDV6 495 aa24.04■■□□□ 1.44
LSM4-204ENST00000594828 OR12D3Q9UGF7 316 aa24.04■■□□□ 1.44
LSM4-204ENST00000594828 C1QTNF9BB2RNN3 333 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 H0Y8X5 98 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 FLRT2O43155 660 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 CALB1P05937 261 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 PROS1P07225 676 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 C1QTNF9P0C862 333 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 ATP1A3P13637 1013 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 RRM1P23921 792 aa24.03■■□□□ 1.44
LSM4-204ENST00000594828 CD38P28907 300 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms