RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 ERBB2P04626 1255 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 OXCT1P55809 520 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 TAS2R38P59533 333 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 SEMG2Q02383 582 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 NME3Q13232 169 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 EFHC1Q5JVL4 640 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 FAM46CQ5VWP2 391 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 OLFML1Q6UWY5 402 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 IQCHQ86VS3 1027 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 SH2D3CQ8N5H7 860 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 C1orf131Q8NDD1 294 aaKnown RBP16.8■□□□□ 0.28
LIG1-205ENST00000593425 MYOCQ99972 504 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 CAAP1Q9H8G2 361 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 VPS28Q9UK41 221 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 AJAP1Q9UKB5 411 aaPredicted RBP16.8■□□□□ 0.28
LIG1-205ENST00000593425 PCDHGC3Q9UN70 934 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 AK5Q9Y6K8 562 aa16.8■□□□□ 0.28
LIG1-205ENST00000593425 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.79■□□□□ 0.28
LIG1-205ENST00000593425 ALOX15BO15296 676 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 PAGE1O75459 146 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 DAB1O75553 588 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 CTSLP07711 333 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 SRCP12931 536 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 CKMT2P17540 419 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 NUDT1P36639 197 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 EIF2S3P41091 472 aaKnown RBP16.79■□□□□ 0.28
LIG1-205ENST00000593425 ZNF177Q13360 481 aaPredicted RBP16.79■□□□□ 0.28
LIG1-205ENST00000593425 STAT4Q14765 748 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 RTP5Q14D33 572 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 PROX2Q3B8N5 592 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 SETMARQ53H47 684 aaPredicted RBP16.79■□□□□ 0.28
LIG1-205ENST00000593425 PIP5KL1Q5T9C9 394 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 OR6B2Q6IFH4 312 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 SHC3Q92529 594 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 PSMB7Q99436 277 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 NRSN2Q9GZP1 204 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 ANLNQ9NQW6 1124 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 APEX2Q9UBZ4 518 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 TBC1D30Q9Y2I9 924 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 SMG1Q96Q15 3661 aaKnown RBP16.79■□□□□ 0.28
LIG1-205ENST00000593425 IGSF10Q6WRI0 2623 aa16.79■□□□□ 0.28
LIG1-205ENST00000593425 ARID1BQ8NFD5 2236 aaPredicted RBP16.78■□□□□ 0.28
LIG1-205ENST00000593425 PRAMEF26H0Y7S4 382 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 I6L893 689 aaPredicted RBP16.78■□□□□ 0.28
LIG1-205ENST00000593425 M0QYT0 321 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 RNF103O00237 685 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 TRIM38O00635 465 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 SNAP91O60641 907 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 MAGEC1O60732 1142 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 RNGTTO60942 597 aaKnown RBP16.78■□□□□ 0.28
LIG1-205ENST00000593425 GADD45BO75293 160 aaPredicted RBP16.78■□□□□ 0.28
LIG1-205ENST00000593425 CLDN11O75508 207 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 CNTN5O94779 1100 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 MT-CO1P00395 513 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 PRLRP16471 622 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 ZNF18P17022 549 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 ACP1P24666 158 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 OVGP1Q12889 678 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 ILKQ13418 452 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 C5orf22Q49AR2 442 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 PTPN20Q4JDL3 420 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 ALFQ53S48 1182 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 C11orf57Q6ZUT1 292 aaPredicted RBP16.78■□□□□ 0.28
LIG1-205ENST00000593425 SLC25A45Q8N413 288 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 TMEM145Q8NBT3 493 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 KLK6Q92876 244 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 ARRDC3Q96B67 414 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 PPP1R9BQ96SB3 815 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 SIK2Q9H0K1 926 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 MUC3BQ9H195 1237 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 PREBQ9HCU5 417 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 FZD3Q9NPG1 666 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 PIGVQ9NUD9 493 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 HS3ST2Q9Y278 367 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 FASNP49327 2511 aaKnown RBP16.78■□□□□ 0.28
LIG1-205ENST00000593425 SHROOM3Q8TF72 1996 aa16.78■□□□□ 0.28
LIG1-205ENST00000593425 K7ERQ8 282 aa16.77■□□□□ 0.28
LIG1-205ENST00000593425 SLC31A1O15431 190 aa16.77■□□□□ 0.28
LIG1-205ENST00000593425 SIGLEC6O43699 453 aa16.77■□□□□ 0.28
LIG1-205ENST00000593425 ADCY5O95622 1261 aa16.77■□□□□ 0.28
LIG1-205ENST00000593425 PNMA6AP0CW24 399 aaPredicted RBP16.77■□□□□ 0.28
LIG1-205ENST00000593425 THEGLP0DJG4 465 aa16.77■□□□□ 0.28
LIG1-205ENST00000593425 TFE3P19532 575 aaPredicted RBP16.77■□□□□ 0.28
LIG1-205ENST00000593425 CDH4P55283 916 aa16.77■□□□□ 0.28
LIG1-205ENST00000593425 INSM1Q01101 510 aaPredicted RBP16.77■□□□□ 0.28
LIG1-205ENST00000593425 SLC6A3Q01959 620 aa16.77■□□□□ 0.28
LIG1-205ENST00000593425 SLC26A9Q7LBE3 791 aa16.77■□□□□ 0.28
LIG1-205ENST00000593425 CREBRFQ8IUR6 639 aa16.77■□□□□ 0.28
LIG1-205ENST00000593425 RFFLQ8WZ73 363 aa16.77■□□□□ 0.28
LIG1-205ENST00000593425 KLHDC7BQ96G42 594 aa16.77■□□□□ 0.28
LIG1-205ENST00000593425 FAM81BQ96LP2 452 aa16.77■□□□□ 0.28
LIG1-205ENST00000593425 PLCB1Q9NQ66 1216 aa16.77■□□□□ 0.28
LIG1-205ENST00000593425 VPS51Q9UID3 782 aa16.77■□□□□ 0.28
LIG1-205ENST00000593425 SNX10Q9Y5X0 201 aa16.77■□□□□ 0.28
LIG1-205ENST00000593425 A0A1W2PQU0 124 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 EIF4E1BA6NMX2 242 aaKnown RBP16.76■□□□□ 0.27
LIG1-205ENST00000593425 SMAD6O43541 496 aaKnown RBP16.76■□□□□ 0.27
LIG1-205ENST00000593425 FGFR1OPO95684 399 aaKnown RBP16.76■□□□□ 0.27
LIG1-205ENST00000593425 PRB1P04280 392 aa16.76■□□□□ 0.27
LIG1-205ENST00000593425 RHOCP08134 193 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms