RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 COPG1Q9Y678 874 aaKnown RBP5.42□□□□□ -1.54
SMAD4-216ENST00000593223 MORC2Q9Y6X9 1032 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-216ENST00000593223 MIA2Q96PC5 1412 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 NUP153P49790 1475 aaKnown RBP5.41□□□□□ -1.54
SMAD4-216ENST00000593223 UGDHO60701 494 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 SGPL1O95470 568 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 CTSAP10619 480 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 AARSP49588 968 aaKnown RBP eCLIP5.41□□□□□ -1.54
SMAD4-216ENST00000593223 CDK7P50613 346 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 PLCD1P51178 756 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 PDCLQ13371 301 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 GPR162Q16538 588 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 INO80DQ53TQ3 878 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-216ENST00000593223 ANKRD45Q5TZF3 282 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 DGAT2L7PQ6IED9 249 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 CCDC70Q6NSX1 233 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 ZNF474Q6S9Z5 364 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-216ENST00000593223 RFX8Q6ZV50 586 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 GET4Q7L5D6 327 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-216ENST00000593223 OR6Y1Q8NGX8 325 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 CSGALNACT1Q8TDX6 532 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 ZFPM2Q8WW38 1151 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 PIGSQ96S52 555 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 DDX23Q9BUQ8 820 aaKnown RBP5.41□□□□□ -1.54
SMAD4-216ENST00000593223 PDE11AQ9HCR9 933 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 SRP68Q9UHB9 627 aaKnown RBP5.41□□□□□ -1.54
SMAD4-216ENST00000593223 KCND3Q9UK17 655 aa5.41□□□□□ -1.54
SMAD4-216ENST00000593223 NOL7Q9UMY1 257 aaKnown RBP5.41□□□□□ -1.54
SMAD4-216ENST00000593223 CHD4Q14839 1912 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 KIDINS220Q9ULH0 1771 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 DPPA5A6NC42 116 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 E7EVH7 732 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 CLGNO14967 610 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 HEXIM1O94992 359 aaKnown RBP5.4□□□□□ -1.54
SMAD4-216ENST00000593223 NFATC1O95644 943 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 HSP90AB1P08238 724 aaKnown RBP5.4□□□□□ -1.54
SMAD4-216ENST00000593223 VEGFAP15692 232 aaPredicted RBP5.4□□□□□ -1.54
SMAD4-216ENST00000593223 IGFBP2P18065 325 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 CST5P28325 142 aaPredicted RBP5.4□□□□□ -1.54
SMAD4-216ENST00000593223 HALP42357 657 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 RBM5P52756 815 aaKnown RBP eCLIP5.4□□□□□ -1.54
SMAD4-216ENST00000593223 PRKAA2P54646 552 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 RABEP1Q15276 862 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 ALFQ53S48 1182 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 BRINP3Q76B58 766 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 SYT13Q7L8C5 426 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 UBE2Q1Q7Z7E8 422 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 ARL14EPQ8N8R7 260 aaPredicted RBP5.4□□□□□ -1.54
SMAD4-216ENST00000593223 CCDC89Q8N998 374 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 MYRIPQ8NFW9 859 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 ZNF622Q969S3 477 aaKnown RBP eCLIP5.4□□□□□ -1.54
SMAD4-216ENST00000593223 ADAD1Q96M93 576 aaKnown RBP5.4□□□□□ -1.54
SMAD4-216ENST00000593223 NEUROD6Q96NK8 337 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 ZNF347Q96SE7 839 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 HERPUD2Q9BSE4 406 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 SPRTNQ9H040 489 aaPredicted RBP5.4□□□□□ -1.54
SMAD4-216ENST00000593223 TMLHEQ9NVH6 421 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 MTMR4Q9NYA4 1195 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 KIF17Q9P2E2 1029 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 RNF7Q9UBF6 113 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 SLC25A13Q9UJS0 675 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 TNFSF13BQ9Y275 285 aa5.4□□□□□ -1.54
SMAD4-216ENST00000593223 PRDM15P57071 1507 aaPredicted RBP5.39□□□□□ -1.55
SMAD4-216ENST00000593223 TIAM1Q13009 1591 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 F8W810 466 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 TLR2O60603 784 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 FGBP02675 491 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 CIITAP33076 1130 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 CUL4BQ13620 913 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 TAF5Q15542 800 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 TTLL5Q6EMB2 1281 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 KIAA1324Q6UXG2 1013 aaKnown RBP5.39□□□□□ -1.55
SMAD4-216ENST00000593223 LRIG3Q6UXM1 1119 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 CREBRFQ8IUR6 639 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 SMAP1Q8IYB5 467 aaPredicted RBP5.39□□□□□ -1.55
SMAD4-216ENST00000593223 ANKRD42Q8N9B4 389 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 FSIP1Q8NA03 581 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 PIGOQ8TEQ8 1089 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 AFG1LQ8WV93 481 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 SMG7Q92540 1137 aaKnown RBP5.39□□□□□ -1.55
SMAD4-216ENST00000593223 LRRC59Q96AG4 307 aaKnown RBP5.39□□□□□ -1.55
SMAD4-216ENST00000593223 ARRDC3Q96B67 414 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 ZNF778Q96MU6 729 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 TTC14Q96N46 770 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 TUBB6Q9BUF5 446 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 PAPOLBQ9NRJ5 636 aaKnown RBP5.39□□□□□ -1.55
SMAD4-216ENST00000593223 PNPLA6Q8IY17 1366 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 TNS2Q63HR2 1409 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 SETD5Q9C0A6 1442 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 RALGAPBQ86X10 1494 aa5.39□□□□□ -1.55
SMAD4-216ENST00000593223 UNC13BO14795 1591 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 IRAK2O43187 625 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 HNRNPRO43390 633 aaKnown RBP5.38□□□□□ -1.55
SMAD4-216ENST00000593223 DHX16O60231 1041 aaKnown RBP5.38□□□□□ -1.55
SMAD4-216ENST00000593223 TOP3BO95985 862 aaKnown RBP5.38□□□□□ -1.55
SMAD4-216ENST00000593223 B4GALNT1Q00973 533 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 RBMS2Q15434 407 aaKnown RBP5.38□□□□□ -1.55
SMAD4-216ENST00000593223 ADCK5Q3MIX3 580 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 LRRC24Q50LG9 513 aa5.38□□□□□ -1.55
SMAD4-216ENST00000593223 ARL13AQ5H913 290 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms