RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 KLHL35Q6PF15 583 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.31■□□□□ 0.52
SPC24-206ENST00000592540 CLEC4CQ8WTT0 213 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 ATP6V1E2Q96A05 226 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 MARK4Q96L34 752 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 ZNF512Q96ME7 567 aaPredicted RBP18.31■□□□□ 0.52
SPC24-206ENST00000592540 ACE2Q9BYF1 805 aaPredicted RBP18.31■□□□□ 0.52
SPC24-206ENST00000592540 COQ10BQ9H8M1 238 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 LRRC40Q9H9A6 602 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 ARHGEF37A1IGU5 675 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 MAGEB3O15480 346 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 H6PDO95479 791 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 SETSIPP0DME0 302 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 ARL4AP40617 200 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 NSUN2Q08J23 767 aaKnown RBP eCLIP18.31■□□□□ 0.52
SPC24-206ENST00000592540 PRKAA1Q13131 559 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 LIPMQ5VYY2 423 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 ACOT1Q86TX2 421 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 ZNF567Q8N184 647 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 TTC39CQ8N584 583 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 CNTD1Q8N815 330 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 OR52K1Q8NGK4 314 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 ZSCAN18Q8TBC5 510 aaPredicted RBP18.31■□□□□ 0.52
SPC24-206ENST00000592540 TRAPPC12Q8WVT3 735 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 NPAS2Q99743 824 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 ASB7Q9H672 318 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 LIN28AQ9H9Z2 209 aaKnown RBP18.31■□□□□ 0.52
SPC24-206ENST00000592540 MID2Q9UJV3 735 aa18.31■□□□□ 0.52
SPC24-206ENST00000592540 TCAF2A6NFQ2 919 aa18.3■□□□□ 0.52
SPC24-206ENST00000592540 TRIM38O00635 465 aa18.3■□□□□ 0.52
SPC24-206ENST00000592540 GLUD2P49448 558 aa18.3■□□□□ 0.52
SPC24-206ENST00000592540 TMEM132DQ14C87 1099 aa18.3■□□□□ 0.52
SPC24-206ENST00000592540 SLC10A6Q3KNW5 377 aa18.3■□□□□ 0.52
SPC24-206ENST00000592540 SH3D19Q5HYK7 790 aa18.3■□□□□ 0.52
SPC24-206ENST00000592540 ZYG11AQ6WRX3 759 aa18.3■□□□□ 0.52
SPC24-206ENST00000592540 CARM1Q86X55 608 aa18.3■□□□□ 0.52
SPC24-206ENST00000592540 ZDHHC17Q8IUH5 632 aa18.3■□□□□ 0.52
SPC24-206ENST00000592540 EXOC8Q8IYI6 725 aa18.3■□□□□ 0.52
SPC24-206ENST00000592540 ACVR1CQ8NER5 493 aa18.3■□□□□ 0.52
SPC24-206ENST00000592540 OSBPL11Q9BXB4 747 aa18.3■□□□□ 0.52
SPC24-206ENST00000592540 SEMA6AQ9H2E6 1030 aa18.3■□□□□ 0.52
SPC24-206ENST00000592540 VTI1BQ9UEU0 232 aa18.3■□□□□ 0.52
SPC24-206ENST00000592540 SNX9Q9Y5X1 595 aa18.3■□□□□ 0.52
SPC24-206ENST00000592540 TK2O00142 265 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 JUNP05412 331 aaKnown RBP18.29■□□□□ 0.52
SPC24-206ENST00000592540 IFRD2Q12894 506 aaPredicted RBP18.29■□□□□ 0.52
SPC24-206ENST00000592540 IKBKEQ14164 716 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 PTK2BQ14289 1009 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 MEX3CQ5U5Q3 659 aaKnown RBP18.29■□□□□ 0.52
SPC24-206ENST00000592540 POTEHQ6S545 545 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 METTL7BQ6UX53 244 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 TRIM67Q6ZTA4 783 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 LPCAT2Q7L5N7 544 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 ZNF554Q86TJ5 538 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 FNDC8Q8TC99 324 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 GRIN3AQ8TCU5 1115 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 STON2Q8WXE9 905 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 HSPBAP1Q96EW2 488 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 IL22Q9GZX6 179 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 AS3MTQ9HBK9 375 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 AP4S1Q9Y587 144 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 HEMK1Q9Y5R4 338 aaPredicted RBP18.29■□□□□ 0.52
SPC24-206ENST00000592540 COPG1Q9Y678 874 aaKnown RBP18.29■□□□□ 0.52
SPC24-206ENST00000592540 BRWD3Q6RI45 1802 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 CITO14578 2027 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 SCN1AP35498 2009 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 CROCCQ5TZA2 2017 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 TANC1Q9C0D5 1861 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 ZCWPW2A0A1B0GU75 182 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 H3BNH8 94 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 APOA4P06727 396 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 HNRNPCP07910 306 aaKnown RBP eCLIP18.29■□□□□ 0.523e-9■■■■□ 24.9
SPC24-206ENST00000592540 SNX16P57768 344 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 RBP5P82980 135 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 TNFAIP1Q13829 316 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 SOWAHAQ2M3V2 549 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 CATSPERGQ6ZRH7 1159 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 TMEM135Q86UB9 458 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 TMEM151AQ8N4L1 468 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 CCNYQ8ND76 341 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 RDH11Q8TC12 318 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 ASB9Q96DX5 294 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 BIRC8Q96P09 236 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 MAF1Q9H063 256 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 FAM124BQ9H5Z6 455 aaPredicted RBP18.29■□□□□ 0.52
SPC24-206ENST00000592540 TASP1Q9H6P5 420 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 C20orf96Q9NUD7 363 aaPredicted RBP18.29■□□□□ 0.52
SPC24-206ENST00000592540 DPP3Q9NY33 737 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 IGSF9Q9P2J2 1179 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 SH3BP1Q9Y3L3 701 aa18.29■□□□□ 0.52
SPC24-206ENST00000592540 SLCO1B7G3V0H7 640 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 XPO1O14980 1071 aaKnown RBP18.28■□□□□ 0.52
SPC24-206ENST00000592540 TIMM44O43615 452 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 USP12O75317 370 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 SBK3P0C264 359 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 NELFEP18615 380 aaKnown RBP18.28■□□□□ 0.52
SPC24-206ENST00000592540 TPP2P29144 1249 aaPredicted RBP18.28■□□□□ 0.52
SPC24-206ENST00000592540 NAGLUP54802 743 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 LY6KQ17RY6 165 aa18.28■□□□□ 0.52
SPC24-206ENST00000592540 SLC26A9Q7LBE3 791 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms