RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	SUZ12	Q15022	739 aa	Known RBP	13.65	□□□□□ -0.22
NPC1-212	ENST00000591107	RNF219	Q5W0B1	726 aa	Predicted RBP	13.65	□□□□□ -0.22
NPC1-212	ENST00000591107	USP30	Q70CQ3	517 aa		13.65	□□□□□ -0.22
NPC1-212	ENST00000591107	EID2	Q8N6I1	236 aa		13.65	□□□□□ -0.22
NPC1-212	ENST00000591107	OR14C36	Q8NHC7	312 aa		13.65	□□□□□ -0.22
NPC1-212	ENST00000591107	PTPRN2	Q92932	1015 aa		13.65	□□□□□ -0.22
NPC1-212	ENST00000591107	FAM129B	Q96TA1	746 aa		13.65	□□□□□ -0.22
NPC1-212	ENST00000591107	CRACR2A	Q9BSW2	395 aa		13.65	□□□□□ -0.22
NPC1-212	ENST00000591107	NDST4	Q9H3R1	872 aa		13.65	□□□□□ -0.22
NPC1-212	ENST00000591107	FAM204A	Q9H8W3	233 aa		13.65	□□□□□ -0.22
NPC1-212	ENST00000591107	OSGEP	Q9NPF4	335 aa		13.65	□□□□□ -0.22
NPC1-212	ENST00000591107	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.65	□□□□□ -0.22
NPC1-212	ENST00000591107	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.65	□□□□□ -0.22
NPC1-212	ENST00000591107	DOCK9	Q9BZ29	2069 aa		13.65	□□□□□ -0.22
NPC1-212	ENST00000591107	ITIH6	Q6UXX5	1313 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	BPTF	Q12830	3046 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	EDDM13	A0A1B0GTR0	161 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107		A0A1W2PR77	199 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	VILL	O15195	856 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	BNIP3L	O60238	219 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	RNASEH1	O60930	286 aa	Known RBP	13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	PNMA6A	P0CW24	399 aa	Predicted RBP	13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	EPHA8	P29322	1005 aa	Predicted RBP	13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	DRD3	P35462	400 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	ECT2L	Q008S8	904 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	GCNT1	Q02742	428 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	UBXN1	Q04323	297 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	KCNH2	Q12809	1159 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	BNIP3	Q12983	259 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	PDCL	Q13371	301 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	STIL	Q15468	1287 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	FKBP15	Q5T1M5	1219 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	CCAR2	Q8N163	923 aa	Known RBP	13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	EHBP1	Q8NDI1	1231 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	OR2T34	Q8NGX1	318 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	SERAC1	Q96JX3	654 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	CNDP2	Q96KP4	475 aa	Known RBP	13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	ELF4	Q99607	663 aa	Predicted RBP	13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	DDX50	Q9BQ39	737 aa	Known RBP	13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	SARDH	Q9UL12	918 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	SNX10	Q9Y5X0	201 aa		13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	COL5A1	P20908	1838 aa	Predicted RBP	13.64	□□□□□ -0.23
NPC1-212	ENST00000591107	LRRC72	A6NJI9	287 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107		F5H5T6	163 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	RNF103	O00237	685 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	ENC1	O14682	589 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	IGLV3-25	P01717	112 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	AFP	P02771	609 aa	Known RBP	13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	ITGAV	P06756	1048 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	ABCB4	P21439	1286 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	CD38	P28907	300 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	CDC25B	P30305	580 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	GNA15	P30679	374 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	USP8	P40818	1118 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	RPL34	P49207	117 aa	Known RBP	13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	NNT	Q13423	1086 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	SMAD1	Q15797	465 aa	Known RBP	13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	QPCT	Q16769	361 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	ARHGAP44	Q17R89	818 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	CXorf57	Q6NSI4	855 aa	Known RBP	13.63	□□□□□ -0.23
NPC1-212	ENST00000591107		Q6ZVU0	165 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	SPATS2	Q86XZ4	545 aa	Known RBP	13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	DRC7	Q8IY82	874 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	DEFB106A	Q8N104	65 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	PIP4K2C	Q8TBX8	421 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	SAP25	Q8TEE9	199 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	AZIN2	Q96A70	460 aa		13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	PRMT1	Q99873	361 aa	Known RBP	13.63	□□□□□ -0.23
NPC1-212	ENST00000591107	TBC1D3D	A0A087WVF3	549 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	TBC1D3I	A0A087WXS9	549 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	TBC1D3E	A0A087X179	549 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	TBC1D3K	A0A087X1G2	549 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	C10orf142	B7Z368	130 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	TBC1D3L	B9A6J9	549 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	PMM2	O15305	246 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	MOCS3	O95396	460 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	SRPRA	P08240	638 aa	Known RBP	13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	TBC1D3H	P0C7X1	549 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	GOT1	P17174	413 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	ITPKB	P27987	946 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	ACADVL	P49748	655 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	NXPH1	P58417	271 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	CCDC173	Q0VFZ6	552 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	INAVA	Q3KP66	663 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	HES3	Q5TGS1	186 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	OTUD1	Q5VV17	481 aa	Predicted RBP	13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	TBC1D3G	Q6DHY5	549 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	TBC1D3C	Q6IPX1	549 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	FAM183BP	Q6ZVS7	135 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.62	□□□□□ -0.23	1e-8	■■□□□ 14.2
NPC1-212	ENST00000591107	TMC6	Q7Z403	805 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	C14orf80	Q86SX3	495 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	VSTM4	Q8IW00	320 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	GALNT15	Q8N3T1	639 aa		13.62	□□□□□ -0.23
NPC1-212	ENST00000591107	SPC24	Q8NBT2	197 aa		13.62	□□□□□ -0.23

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