RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 METTL12A8MUP2 240 aa22.89■■□□□ 1.25
MBD3-208ENST00000590830 TPM3P06753 285 aa22.89■■□□□ 1.25
MBD3-208ENST00000590830 SLC8A1P32418 973 aa22.89■■□□□ 1.25
MBD3-208ENST00000590830 ACVRL1P37023 503 aa22.89■■□□□ 1.25
MBD3-208ENST00000590830 KRT83P78385 493 aa22.89■■□□□ 1.25
MBD3-208ENST00000590830 GNA12Q03113 381 aa22.89■■□□□ 1.25
MBD3-208ENST00000590830 SEMA3BQ13214 749 aa22.89■■□□□ 1.25
MBD3-208ENST00000590830 PUM1Q14671 1186 aaKnown RBP eCLIP22.89■■□□□ 1.252e-6■■■□□ 16.4
MBD3-208ENST00000590830 ACCSLQ4AC99 568 aa22.89■■□□□ 1.25
MBD3-208ENST00000590830 ZNF783Q6ZMS7 281 aa22.89■■□□□ 1.25
MBD3-208ENST00000590830 VSTM4Q8IW00 320 aa22.89■■□□□ 1.25
MBD3-208ENST00000590830 DCAF4L2Q8NA75 395 aa22.89■■□□□ 1.25
MBD3-208ENST00000590830 TBC1D31Q96DN5 1066 aa22.89■■□□□ 1.25
MBD3-208ENST00000590830 C2orf49Q9BVC5 232 aaPredicted RBP22.89■■□□□ 1.25
MBD3-208ENST00000590830 C6orf106Q9H6K1 298 aaPredicted RBP22.89■■□□□ 1.25
MBD3-208ENST00000590830 TMEM248Q9NWD8 314 aa22.89■■□□□ 1.25
MBD3-208ENST00000590830 GPATCH2LQ9NWQ4 482 aa22.89■■□□□ 1.25
MBD3-208ENST00000590830 EVLQ9UI08 416 aaPredicted RBP22.89■■□□□ 1.25
MBD3-208ENST00000590830 DNAI1Q9UI46 699 aa22.89■■□□□ 1.25
MBD3-208ENST00000590830 CDV3Q9UKY7 258 aaKnown RBP22.89■■□□□ 1.25
MBD3-208ENST00000590830 NENFQ9UMX5 172 aa22.89■■□□□ 1.25
MBD3-208ENST00000590830 SLC30A4O14863 429 aa22.88■■□□□ 1.25
MBD3-208ENST00000590830 RNASEH1O60930 286 aaKnown RBP22.88■■□□□ 1.25
MBD3-208ENST00000590830 MYBL1P10243 752 aa22.88■■□□□ 1.25
MBD3-208ENST00000590830 METAP1P53582 386 aa22.88■■□□□ 1.25
MBD3-208ENST00000590830 TRIM61Q5EBN2 209 aa22.88■■□□□ 1.25
MBD3-208ENST00000590830 EFHC2Q5JST6 749 aa22.88■■□□□ 1.25
MBD3-208ENST00000590830 Q6ZVU0 165 aa22.88■■□□□ 1.25
MBD3-208ENST00000590830 AADATQ8N5Z0 425 aa22.88■■□□□ 1.25
MBD3-208ENST00000590830 DNASE2BQ8WZ79 361 aa22.88■■□□□ 1.25
MBD3-208ENST00000590830 FOXJ1Q92949 421 aa22.88■■□□□ 1.25
MBD3-208ENST00000590830 PEBP4Q96S96 227 aa22.88■■□□□ 1.25
MBD3-208ENST00000590830 ACE2Q9BYF1 805 aaPredicted RBP22.88■■□□□ 1.25
MBD3-208ENST00000590830 THAP2Q9H0W7 228 aa22.88■■□□□ 1.25
MBD3-208ENST00000590830 RETREG1Q9H6L5 497 aa22.88■■□□□ 1.25
MBD3-208ENST00000590830 FSCN3Q9NQT6 498 aa22.88■■□□□ 1.25
MBD3-208ENST00000590830 FBXL12Q9NXK8 326 aa22.88■■□□□ 1.25
MBD3-208ENST00000590830 SARDHQ9UL12 918 aa22.88■■□□□ 1.25
MBD3-208ENST00000590830 DOCK4Q8N1I0 1966 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 ZNF821O75541 412 aaPredicted RBP22.87■■□□□ 1.25
MBD3-208ENST00000590830 CD160O95971 181 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 HOXD12P35452 270 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 PSMD8P48556 350 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 LIMK1P53667 647 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 ARF5P84085 180 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 ELAVL3Q14576 367 aaKnown RBP22.87■■□□□ 1.25
MBD3-208ENST00000590830 CA9Q16790 459 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 STPG1Q5TH74 334 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 DCAF12L1Q5VU92 463 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 SLC23A3Q6PIS1 610 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 CYP4V2Q6ZWL3 525 aaPredicted RBP22.87■■□□□ 1.25
MBD3-208ENST00000590830 USP30Q70CQ3 517 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 ATP11CQ8NB49 1132 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 FNIP1Q8TF40 1166 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 TRIM11Q96F44 468 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 BTBD1Q9H0C5 482 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 NEUROG2Q9H2A3 272 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 NOL6Q9H6R4 1146 aaKnown RBP22.87■■□□□ 1.25
MBD3-208ENST00000590830 ATP13A1Q9HD20 1204 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 PCSK1NQ9UHG2 260 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 SCML1Q9UN30 329 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 ACTL7AQ9Y615 435 aa22.87■■□□□ 1.25
MBD3-208ENST00000590830 A0A1W2PP55 124 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 CBX4O00257 560 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 CDX4O14627 284 aaPredicted RBP22.86■■□□□ 1.25
MBD3-208ENST00000590830 TM4SF5O14894 197 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 IL1BP01584 269 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 SDHBP21912 280 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 MIPP30301 263 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 EIF4A3P38919 411 aaKnown RBP22.86■■□□□ 1.25
MBD3-208ENST00000590830 MAPKAPK2P49137 400 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 AIF1P55008 147 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 NUMA1Q14980 2115 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 TTC31Q49AM3 519 aaPredicted RBP22.86■■□□□ 1.25
MBD3-208ENST00000590830 SYCP2LQ5T4T6 812 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 DAB2IPQ5VWQ8 1189 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 ALKBH5Q6P6C2 394 aaKnown RBP22.86■■□□□ 1.25
MBD3-208ENST00000590830 RGL4Q8IZJ4 473 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 OR8K1Q8NGG5 319 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 ARHGEF2Q92974 986 aaKnown RBP22.86■■□□□ 1.25
MBD3-208ENST00000590830 ARHGEF26Q96DR7 871 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 DNAJC7Q99615 494 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 EDEM2Q9BV94 578 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 CAPN10Q9HC96 672 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 PPM1HQ9ULR3 514 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 SLCO1B1Q9Y6L6 691 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 SCINQ9Y6U3 715 aa22.86■■□□□ 1.25
MBD3-208ENST00000590830 CEP192Q8TEP8 1941 aa22.85■■□□□ 1.25
MBD3-208ENST00000590830 DCDC2BA2VCK2 349 aa22.85■■□□□ 1.25
MBD3-208ENST00000590830 RNF103O00237 685 aa22.85■■□□□ 1.25
MBD3-208ENST00000590830 MCF2LO15068 1137 aa22.85■■□□□ 1.25
MBD3-208ENST00000590830 CREB3O43889 395 aa22.85■■□□□ 1.25
MBD3-208ENST00000590830 SEMA4FO95754 770 aa22.85■■□□□ 1.25
MBD3-208ENST00000590830 CYP1A2P05177 515 aa22.85■■□□□ 1.25
MBD3-208ENST00000590830 C5AR1P21730 350 aa22.85■■□□□ 1.25
MBD3-208ENST00000590830 EPHB2P29323 1055 aa22.85■■□□□ 1.25
MBD3-208ENST00000590830 DPP6P42658 865 aa22.85■■□□□ 1.25
MBD3-208ENST00000590830 DUOXA1Q1HG43 343 aa22.85■■□□□ 1.25
MBD3-208ENST00000590830 ASTE1Q2TB18 679 aaPredicted RBP22.85■■□□□ 1.25
MBD3-208ENST00000590830 WDR45BQ5MNZ6 344 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms