RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 ALG14Q96F25 216 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 C1orf74Q96LT6 269 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 RPRD1AQ96P16 312 aaPredicted RBP11.54□□□□□ -0.56
SMAD4-211ENST00000590499 ARRDC1-AS1Q9H2J1 176 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 TAS2R14Q9NYV8 317 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 USP18Q9UMW8 372 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 PLA2G4CQ9UP65 541 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 PAXBP1Q9Y5B6 917 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 SNX10Q9Y5X0 201 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 ITIH6Q6UXX5 1313 aa11.54□□□□□ -0.56
SMAD4-211ENST00000590499 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 A0A1W2PQJ5 194 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 SIGLEC16A6NMB1 481 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 DRGXA6NNA5 263 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 H0Y626 953 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 SYNCRIPO60506 623 aaKnown RBP11.53□□□□□ -0.56
SMAD4-211ENST00000590499 CLDN11O75508 207 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 CNTN5O94779 1100 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 SRPRAP08240 638 aaKnown RBP11.53□□□□□ -0.56
SMAD4-211ENST00000590499 ZNF806P0C7X5 589 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 KRT3P12035 628 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 PDGFRAP16234 1089 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 MZF1P28698 734 aaPredicted RBP11.53□□□□□ -0.56
SMAD4-211ENST00000590499 SDC4P31431 198 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 RFC1P35251 1148 aaPredicted RBP11.53□□□□□ -0.56
SMAD4-211ENST00000590499 PTGER3P43115 390 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 HDAC4P56524 1084 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 UBASH3AP57075 661 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 ATP11AP98196 1134 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 ASIC2Q16515 512 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 ALFQ53S48 1182 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 ACBD5Q5T8D3 534 aaPredicted RBP11.53□□□□□ -0.56
SMAD4-211ENST00000590499 SH3PXD2AQ5TCZ1 1133 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 SFMBT2Q5VUG0 894 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 ACAD10Q6JQN1 1059 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 KIAA1324Q6UXG2 1013 aaKnown RBP11.53□□□□□ -0.56
SMAD4-211ENST00000590499 STRADAQ7RTN6 431 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 CYP2U1Q7Z449 544 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 FAM131BQ86XD5 332 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 TMPRSS6Q8IU80 811 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 CCDC117Q8IWD4 279 aaPredicted RBP11.53□□□□□ -0.56
SMAD4-211ENST00000590499 TMEFF1Q8IYR6 380 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 MCOLN2Q8IZK6 566 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 RMDN1Q96DB5 314 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 HAPLN3Q96S86 360 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 SIK2Q9H0K1 926 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 HAUS4Q9H6D7 363 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 PRDM16Q9HAZ2 1276 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 PRSS16Q9NQE7 514 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 SEPT11Q9NVA2 429 aaKnown RBP11.53□□□□□ -0.56
SMAD4-211ENST00000590499 DLL3Q9NYJ7 618 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 ZNF212Q9UDV6 495 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 CYP8B1Q9UNU6 501 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 ERVW-1Q9UQF0 538 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 TBC1D30Q9Y2I9 924 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 OR51B4Q9Y5P0 310 aa11.53□□□□□ -0.56
SMAD4-211ENST00000590499 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.53□□□□□ -0.56
SMAD4-211ENST00000590499 GOLGA6L19H0YKK7 550 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 DDX3XO00571 662 aaKnown RBP eCLIP11.52□□□□□ -0.57
SMAD4-211ENST00000590499 MOCS3O95396 460 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 TNFAIP3P21580 790 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 RRM1P23921 792 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 CDH4P55283 916 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 OXCT1P55809 520 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 ECT2LQ008S8 904 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 NRG1Q02297 640 aaPredicted RBP11.52□□□□□ -0.57
SMAD4-211ENST00000590499 CREB5Q02930 508 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 SF3A2Q15428 464 aaKnown RBP11.52□□□□□ -0.57
SMAD4-211ENST00000590499 CCDC6Q16204 474 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 HNRNPA1L2Q32P51 320 aaKnown RBP11.52□□□□□ -0.57
SMAD4-211ENST00000590499 MANEALQ5VSG8 457 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 PEAR1Q5VY43 1037 aaPredicted RBP11.52□□□□□ -0.57
SMAD4-211ENST00000590499 HGSNATQ68CP4 663 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 WDR59Q6PJI9 974 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 SLC36A4Q6YBV0 504 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 LPCAT2Q7L5N7 544 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 SIPA1Q96FS4 1042 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 VCPIP1Q96JH7 1222 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 FEM1AQ9BSK4 669 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 NUP58Q9BVL2 599 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 SELENOOQ9BVL4 669 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 SMOC1Q9H4F8 434 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 MTG2Q9H4K7 406 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 FBRSQ9HAH7 460 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 ITM2CQ9NQX7 267 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 ENAMQ9NRM1 1142 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 VPS45Q9NRW7 570 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 IFNKQ9P0W0 207 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 NEU3Q9UQ49 428 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 KNL1Q8NG31 2342 aa11.52□□□□□ -0.57
SMAD4-211ENST00000590499 PCDH15Q96QU1 1955 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.51□□□□□ -0.57
SMAD4-211ENST00000590499 PRR5-ARHGAP8B1AHC4 643 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 E9PAM4 449 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 CCP110O43303 1012 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 FOXD2O60548 495 aaPredicted RBP11.51□□□□□ -0.57
SMAD4-211ENST00000590499 GZMAP12544 262 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 RHOQP17081 205 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 GPD1P21695 349 aa11.51□□□□□ -0.57
SMAD4-211ENST00000590499 CD6P30203 668 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms