RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 TBC1D31Q96DN5 1066 aa22.05■■□□□ 1.12
R3HDM4-206ENST00000590454 NCAPGQ9BPX3 1015 aa22.05■■□□□ 1.12
R3HDM4-206ENST00000590454 ZYG11BQ9C0D3 744 aa22.05■■□□□ 1.12
R3HDM4-206ENST00000590454 SLC32A1Q9H598 525 aa22.05■■□□□ 1.12
R3HDM4-206ENST00000590454 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.05■■□□□ 1.12
R3HDM4-206ENST00000590454 PPARGC1AQ9UBK2 798 aaKnown RBP22.05■■□□□ 1.12
R3HDM4-206ENST00000590454 EVLQ9UI08 416 aaPredicted RBP22.05■■□□□ 1.12
R3HDM4-206ENST00000590454 GGA2Q9UJY4 613 aa22.05■■□□□ 1.12
R3HDM4-206ENST00000590454 INTS6Q9UL03 887 aaKnown RBP22.05■■□□□ 1.12
R3HDM4-206ENST00000590454 NEUROG3Q9Y4Z2 214 aa22.05■■□□□ 1.12
R3HDM4-206ENST00000590454 ALG6Q9Y672 507 aa22.05■■□□□ 1.12
R3HDM4-206ENST00000590454 MOCS3O95396 460 aa22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 BCKDHBP21953 392 aa22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 MZF1P28698 734 aaPredicted RBP22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 NAP1L1P55209 391 aaKnown RBP22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 CDH4P55283 916 aa22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 CCDC173Q0VFZ6 552 aa22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 FUT11Q495W5 492 aa22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 BOLA3Q53S33 107 aa22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 PPP6R3Q5H9R7 873 aaPredicted RBP22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 ACBD5Q5T8D3 534 aaPredicted RBP22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 ANO7Q6IWH7 933 aa22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 ADIPOR2Q86V24 386 aa22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 APCDD1Q8J025 514 aa22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.04■■□□□ 1.125e-7■■■■■ 47.8
R3HDM4-206ENST00000590454 USP33Q8TEY7 942 aa22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 TEKT4Q8WW24 435 aa22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 SORCS1Q8WY21 1168 aa22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 PIGKQ92643 395 aa22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 LCMT1Q9UIC8 334 aa22.04■■□□□ 1.12
R3HDM4-206ENST00000590454 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 GRID2IPA4D2P6 1211 aa22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 CLDN11O75508 207 aa22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 CD48P09326 243 aa22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 PABPC1P11940 636 aaKnown RBP22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 TNNT1P13805 278 aa22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 GOT1P17174 413 aa22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 EPHB2P29323 1055 aa22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 CSKP41240 450 aa22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 ARSEP51690 589 aa22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 ZNF177Q13360 481 aaPredicted RBP22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 DPYSL2Q16555 572 aa22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 C11orf63Q6NUN7 778 aa22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 ANKS1BQ7Z6G8 1248 aa22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 PSTKQ8IV42 348 aaKnown RBP22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 EPAS1Q99814 870 aa22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 NUSAP1Q9BXS6 441 aaKnown RBP22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 PCDH18Q9HCL0 1135 aa22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 CWC15Q9P013 229 aaKnown RBP22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 LHX6Q9UPM6 363 aa22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 TBC1D30Q9Y2I9 924 aa22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 PPP2R2CQ9Y2T4 447 aa22.03■■□□□ 1.12
R3HDM4-206ENST00000590454 CCDC175P0C221 793 aa22.02■■□□□ 1.12
R3HDM4-206ENST00000590454 RHOQP17081 205 aa22.02■■□□□ 1.12
R3HDM4-206ENST00000590454 TNFRSF4P43489 277 aa22.02■■□□□ 1.12
R3HDM4-206ENST00000590454 KIR2DL1P43626 348 aaPredicted RBP22.02■■□□□ 1.12
R3HDM4-206ENST00000590454 TPI1P60174 286 aa22.02■■□□□ 1.12
R3HDM4-206ENST00000590454 MMRN1Q13201 1228 aa22.02■■□□□ 1.12
R3HDM4-206ENST00000590454 HADHQ16836 314 aaKnown RBP22.02■■□□□ 1.12
R3HDM4-206ENST00000590454 C2orf27AQ580R0 203 aa22.02■■□□□ 1.12
R3HDM4-206ENST00000590454 TRIM61Q5EBN2 209 aa22.02■■□□□ 1.12
R3HDM4-206ENST00000590454 KIAA1211LQ6NV74 962 aa22.02■■□□□ 1.12
R3HDM4-206ENST00000590454 DAAM2Q86T65 1068 aa22.02■■□□□ 1.12
R3HDM4-206ENST00000590454 LRRC57Q8N9N7 239 aa22.02■■□□□ 1.12
R3HDM4-206ENST00000590454 ALG14Q96F25 216 aa22.02■■□□□ 1.12
R3HDM4-206ENST00000590454 MSRB2Q9Y3D2 182 aa22.02■■□□□ 1.12
R3HDM4-206ENST00000590454 EEF2KO00418 725 aaKnown RBP22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 SPOPO43791 374 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 HYAL3O43820 417 aaPredicted RBP22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 NRDCO43847 1150 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 ALDH1A2O94788 518 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 IL4RP24394 825 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 TIE1P35590 1138 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 SLC1A1P43005 524 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 MARCKSL1P49006 195 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 CRY1Q16526 586 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 PITRM1Q5JRX3 1037 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 RNF219Q5W0B1 726 aaPredicted RBP22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 EGFLAMQ63HQ2 1017 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 RFX8Q6ZV50 586 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 POLNQ7Z5Q5 900 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 MDGA1Q8NFP4 955 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 RAPGEF5Q92565 580 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 TSC1Q92574 1164 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 ACOX2Q99424 681 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 LZTFL1Q9NQ48 299 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 TMEM248Q9NWD8 314 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 KIAA1522Q9P206 1035 aaPredicted RBP22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 DNAI1Q9UI46 699 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 MMP17Q9ULZ9 603 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 GUCA1BQ9UMX6 200 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 MFHAS1Q9Y4C4 1052 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 OR51B4Q9Y5P0 310 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 CAPN6Q9Y6Q1 641 aa22.01■■□□□ 1.11
R3HDM4-206ENST00000590454 MYO18AQ92614 2054 aaKnown RBP22■■□□□ 1.11
R3HDM4-206ENST00000590454 A0A0D9SEW6 157 aa22■■□□□ 1.11
R3HDM4-206ENST00000590454 PALMO75781 387 aa22■■□□□ 1.11
R3HDM4-206ENST00000590454 OR1E1P30953 314 aa22■■□□□ 1.11
R3HDM4-206ENST00000590454 CTSOP43234 321 aaPredicted RBP22■■□□□ 1.11
R3HDM4-206ENST00000590454 CDH6P55285 790 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms