RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 ALDH1A3P47895 512 aa8.26□□□□□ -1.09
SMAD4-209ENST00000589941 BFSP1Q12934 665 aa8.26□□□□□ -1.09
SMAD4-209ENST00000589941 CTTNQ14247 550 aaKnown RBP8.26□□□□□ -1.09
SMAD4-209ENST00000589941 MXD4Q14582 209 aaPredicted RBP8.26□□□□□ -1.09
SMAD4-209ENST00000589941 PFKFB3Q16875 520 aaPredicted RBP8.26□□□□□ -1.09
SMAD4-209ENST00000589941 HLA-BQ31612 363 aa8.26□□□□□ -1.09
SMAD4-209ENST00000589941 Q4G0T1 1027 aa8.26□□□□□ -1.09
SMAD4-209ENST00000589941 ZC2HC1CQ53FD0 456 aaPredicted RBP8.26□□□□□ -1.09
SMAD4-209ENST00000589941 EMC4Q5J8M3 183 aa8.26□□□□□ -1.09
SMAD4-209ENST00000589941 CDCA2Q69YH5 1023 aaPredicted RBP8.26□□□□□ -1.09
SMAD4-209ENST00000589941 DBX2Q6ZNG2 339 aa8.26□□□□□ -1.09
SMAD4-209ENST00000589941 MTDHQ86UE4 582 aaKnown RBP8.26□□□□□ -1.09
SMAD4-209ENST00000589941 FAM129CQ86XR2 697 aa8.26□□□□□ -1.09
SMAD4-209ENST00000589941 C17orf53Q8N3J3 647 aaPredicted RBP8.26□□□□□ -1.09
SMAD4-209ENST00000589941 NECAB1Q8N987 351 aa8.26□□□□□ -1.09
SMAD4-209ENST00000589941 TMEM176AQ96HP8 235 aa8.26□□□□□ -1.09
SMAD4-209ENST00000589941 SYT3Q9BQG1 590 aa8.26□□□□□ -1.09
SMAD4-209ENST00000589941 RNF38Q9H0F5 515 aa8.26□□□□□ -1.09
SMAD4-209ENST00000589941 GLT8D2Q9H1C3 349 aa8.26□□□□□ -1.09
SMAD4-209ENST00000589941 TNMDQ9H2S6 317 aa8.26□□□□□ -1.09
SMAD4-209ENST00000589941 LINC00597Q9H2U6 94 aa8.26□□□□□ -1.09
SMAD4-209ENST00000589941 TDP1Q9NUW8 608 aa8.26□□□□□ -1.09
SMAD4-209ENST00000589941 TUBGCP4Q9UGJ1 667 aa8.26□□□□□ -1.09
SMAD4-209ENST00000589941 RCOR1Q9UKL0 485 aa8.26□□□□□ -1.09
SMAD4-209ENST00000589941 CKAP5Q14008 2032 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 FBN3Q75N90 2809 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 A0A087WWV3 80 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 CRTAMO95727 393 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 PFKLP17858 780 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 POU3F2P20265 443 aaPredicted RBP8.25□□□□□ -1.09
SMAD4-209ENST00000589941 CDC25CP30307 473 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 LIFRP42702 1097 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 EVCP57679 992 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 TMPRSS3P57727 454 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 IL9RQ01113 521 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 GUCY1A3Q02108 690 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 POU5F1BQ06416 359 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 TARDBPQ13148 414 aaKnown RBP eCLIP8.25□□□□□ -1.09
SMAD4-209ENST00000589941 RTP5Q14D33 572 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 PREPLQ4J6C6 727 aaPredicted RBP8.25□□□□□ -1.09
SMAD4-209ENST00000589941 ANO6Q4KMQ2 910 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 DNTTIP2Q5QJE6 756 aaKnown RBP8.25□□□□□ -1.09
SMAD4-209ENST00000589941 HES3Q5TGS1 186 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 CC2D1AQ6P1N0 951 aaPredicted RBP8.25□□□□□ -1.09
SMAD4-209ENST00000589941 LAYNQ6UX15 382 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 MIB1Q86YT6 1006 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 FAM26EQ8N5C1 309 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 EXD3Q8N9H8 876 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 TBCKQ8TEA7 893 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 FGF11Q92914 225 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 ATP2A3Q93084 1043 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 DYDC2Q96IM9 177 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 TCEANC2Q96MN5 208 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 LGMNQ99538 433 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 SEPT5Q99719 369 aaPredicted RBP8.25□□□□□ -1.09
SMAD4-209ENST00000589941 KIFC3Q9BVG8 833 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 KIF9Q9HAQ2 790 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 CD248Q9HCU0 757 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 PRMT7Q9NVM4 692 aaPredicted RBP8.25□□□□□ -1.09
SMAD4-209ENST00000589941 MAFFQ9ULX9 164 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 NUB1Q9Y5A7 615 aa8.25□□□□□ -1.09
SMAD4-209ENST00000589941 SETD2Q9BYW2 2564 aaPredicted RBP8.24□□□□□ -1.09
SMAD4-209ENST00000589941 ZFC3H1O60293 1989 aaKnown RBP8.24□□□□□ -1.09
SMAD4-209ENST00000589941 NBASA2RRP1 2371 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 TCRBV5S2A0A599 114 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 ESYT3A0FGR9 886 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 BTBD18B2RXH4 712 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 FAM47E-STBD1D6RA91 191 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 TNFSF14O43557 240 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 FGF19O95750 216 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 CER1O95813 267 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 CYP17A1P05093 508 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 C8BP07358 591 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 HMGB1P09429 215 aaKnown RBP8.24□□□□□ -1.09
SMAD4-209ENST00000589941 MATKP42679 507 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 WASP42768 502 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 IFNAR2P48551 515 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 GPR15P49685 360 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 RIPPLY3P57055 190 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 OSTNP61366 133 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 MRPS21P82921 87 aaKnown RBP8.24□□□□□ -1.09
SMAD4-209ENST00000589941 DNAJC3Q13217 504 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 GPR17Q13304 367 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 PPP2R5CQ13362 524 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 PRPF4BQ13523 1007 aaKnown RBP8.24□□□□□ -1.09
SMAD4-209ENST00000589941 FAM187BQ17R55 369 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 TBC1D25Q3MII6 688 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 SLC36A4Q6YBV0 504 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 MAEAQ7L5Y9 396 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 LUZP1Q86V48 1076 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 TMPRSS12Q86WS5 348 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 RBM12BQ8IXT5 1001 aaKnown RBP8.24□□□□□ -1.09
SMAD4-209ENST00000589941 C4orf19Q8IY42 314 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 LRRC56Q8IYG6 542 aaPredicted RBP8.24□□□□□ -1.09
SMAD4-209ENST00000589941 PDCL2Q8N4E4 241 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 ENGASEQ8NFI3 743 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 OR10T2Q8NGX3 314 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 PCDH19Q8TAB3 1148 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 CPA5Q8WXQ8 436 aa8.24□□□□□ -1.09
SMAD4-209ENST00000589941 CLUHP3Q96NS8 147 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms