RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 SPATA16Q9BXB7 569 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 OXSMQ9NWU1 459 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 GNEQ9Y223 722 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 DOCK3Q8IZD9 2030 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 FAM72CH0Y354 149 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 DYNC1LI2O43237 492 aaPredicted RBP17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 TIMM44O43615 452 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 BEST1O76090 585 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 CELF2O95319 508 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 ERCC2P18074 760 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 GSTT1P30711 240 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 PNPLA4P41247 253 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 NDUFV1P49821 464 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 DLG1Q12959 904 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 GRM2Q14416 872 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 FAM72AQ5TYM5 149 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 FAM72DQ6L9T8 149 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 PDZD4Q76G19 769 aaPredicted RBP17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 FAM72BQ86X60 149 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 SLC7A14Q8TBB6 771 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 SLC2A13Q96QE2 648 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 CENPKQ9BS16 269 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 MCMBPQ9BTE3 642 aa17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 GATA5Q9BWX5 397 aaPredicted RBP17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 ILKAPQ9H0C8 392 aaPredicted RBP17.19■□□□□ 0.34
PRKCSH-205ENST00000587327 MAGEB16A2A368 324 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 MBLAC1A4D2B0 266 aaPredicted RBP17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 ERI2A8K979 691 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 MATN2O00339 956 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 LTFP02788 710 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 THRAP10827 490 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 ADRA1BP35368 520 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 ABCG1P45844 678 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 MMEL1Q495T6 779 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 AP1ARQ63HQ0 302 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 AGR3Q8TD06 166 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 CNDP1Q96KN2 507 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 FLRT1Q9NZU1 646 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 CPSF2Q9P2I0 782 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 CPA4Q9UI42 421 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 RAD54BQ9Y620 910 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 ZNF638Q14966 1978 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 PCNTO95613 3336 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 NRCAMQ92823 1304 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 CLDN5O00501 218 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 NCAM2O15394 837 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 ZBTB24O43167 697 aaPredicted RBP17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 HUS1O60921 280 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 NPR3P17342 541 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 CYP2B6P20813 491 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 SERPINB5P36952 375 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 TAF6P49848 677 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 CSE1LP55060 971 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 RPL26P61254 145 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 PPIDQ08752 370 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 MPP3Q13368 585 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 CNPY1Q3B7I2 92 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 MORN1Q5T089 497 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 CERCAMQ5T4B2 595 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 KCNMB4Q86W47 210 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 C2orf69Q8N8R5 385 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 RNF169Q8NCN4 708 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 ACVR1CQ8NER5 493 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 KCTD13Q8WZ19 329 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 SLC9A7Q96T83 725 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 LRRC4Q9HBW1 653 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 CHRAC1Q9NRG0 131 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 KLK14Q9P0G3 267 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 STK39Q9UEW8 545 aa17.18■□□□□ 0.34
PRKCSH-205ENST00000587327 PDCD11Q14690 1871 aaKnown RBP17.17■□□□□ 0.34
PRKCSH-205ENST00000587327 RGSL1A5PLK6 1076 aa17.17■□□□□ 0.34
PRKCSH-205ENST00000587327 ATP9BO43861 1147 aa17.17■□□□□ 0.34
PRKCSH-205ENST00000587327 CD68P34810 354 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-205ENST00000587327 OLFML2BQ68BL8 750 aa17.17■□□□□ 0.34
PRKCSH-205ENST00000587327 HFE2Q6ZVN8 426 aa17.17■□□□□ 0.34
PRKCSH-205ENST00000587327 SDCCAG8Q86SQ7 713 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-205ENST00000587327 VPS39Q96JC1 886 aa17.17■□□□□ 0.34
PRKCSH-205ENST00000587327 BTBD9Q96Q07 612 aa17.17■□□□□ 0.34
PRKCSH-205ENST00000587327 MLPHQ9BV36 600 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-205ENST00000587327 C20orf96Q9NUD7 363 aaPredicted RBP17.17■□□□□ 0.34
PRKCSH-205ENST00000587327 PRPF19Q9UMS4 504 aaKnown RBP17.17■□□□□ 0.34
PRKCSH-205ENST00000587327 GOLGA8QA0A0J9YX86 632 aa17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 SMIM35A0A1B0GVV1 85 aa17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 GOLGA8OA6NCC3 632 aa17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 GOLGA8NF8WBI6 632 aa17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 AIM2O14862 343 aa17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 HDAC3O15379 428 aa17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 APOA4P06727 396 aa17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 CHRNGP07510 517 aa17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 CYP2C9P11712 490 aa17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 DARSP14868 501 aaKnown RBP17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 CD1EP15812 388 aa17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 YY1P25490 414 aa17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 PIK3R1P27986 724 aa17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 NPY2RP49146 381 aa17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 RAB27AP51159 221 aa17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 AIF1P55008 147 aa17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 CDC42EP1Q00587 391 aa17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 SEMA3BQ13214 749 aa17.16■□□□□ 0.34
PRKCSH-205ENST00000587327 SV2CQ496J9 727 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms