RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 IGLV3-10A0A075B6K4 115 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.72□□□□□ -0.37
ERCC2-207ENST00000586441 CXorf51AA0A1B0GTR3 108 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 DRGXA6NNA5 263 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 METTL12A8MUP2 240 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 ENC1O14682 589 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 RNASEH1O60930 286 aaKnown RBP12.72□□□□□ -0.37
ERCC2-207ENST00000586441 PAGE1O75459 146 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 GNSP15586 552 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 H2AFXP16104 143 aaPredicted RBP12.72□□□□□ -0.37
ERCC2-207ENST00000586441 CHRNB2P17787 502 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 ITPKAP23677 461 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 MCM3P25205 808 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 CDH4P55283 916 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 CENPCQ03188 943 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 DEUP1Q05D60 604 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 ZNF177Q13360 481 aaPredicted RBP12.72□□□□□ -0.37
ERCC2-207ENST00000586441 CCDC6Q16204 474 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 TRIM61Q5EBN2 209 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 TAF3Q5VWG9 929 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 CCDC70Q6NSX1 233 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 SETD3Q86TU7 594 aaPredicted RBP12.72□□□□□ -0.37
ERCC2-207ENST00000586441 PHF13Q86YI8 300 aaPredicted RBP12.72□□□□□ -0.37
ERCC2-207ENST00000586441 SLC41A1Q8IVJ1 513 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 SYCE1Q8N0S2 351 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 LRRN4CLQ8ND94 238 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 SLC30A5Q8TAD4 765 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 CYB5D2Q8WUJ1 264 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 CPA5Q8WXQ8 436 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 ALG14Q96F25 216 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 TOE1Q96GM8 510 aaKnown RBP12.72□□□□□ -0.37
ERCC2-207ENST00000586441 RPRD1AQ96P16 312 aaPredicted RBP12.72□□□□□ -0.37
ERCC2-207ENST00000586441 EDEM2Q9BV94 578 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 CAPN10Q9HC96 672 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 RXFP3Q9NSD7 469 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 TMEM74BQ9NUR3 256 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 TPX2Q9ULW0 747 aaKnown RBP12.72□□□□□ -0.37
ERCC2-207ENST00000586441 ERVW-1Q9UQF0 538 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 HS3ST4Q9Y661 456 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 CAPN6Q9Y6Q1 641 aa12.72□□□□□ -0.37
ERCC2-207ENST00000586441 DOCK4Q8N1I0 1966 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 EDDM13A0A1B0GTR0 161 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 UPK3BL1B0FP48 263 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 UPK3BL2E5RIL1 263 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 DDX3XO00571 662 aaKnown RBP eCLIP12.71□□□□□ -0.37
ERCC2-207ENST00000586441 CDX4O14627 284 aaPredicted RBP12.71□□□□□ -0.37
ERCC2-207ENST00000586441 DNTTP04053 509 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 TMEM253P0C7T8 217 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 PAFAH1B1P43034 410 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 PTPN9P43378 593 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 RNASE9P60153 205 aaKnown RBP12.71□□□□□ -0.37
ERCC2-207ENST00000586441 TTC31Q49AM3 519 aaPredicted RBP12.71□□□□□ -0.37
ERCC2-207ENST00000586441 OTUD1Q5VV17 481 aaPredicted RBP12.71□□□□□ -0.37
ERCC2-207ENST00000586441 NAA35Q5VZE5 725 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 ZNF776Q68DI1 518 aaPredicted RBP12.71□□□□□ -0.37
ERCC2-207ENST00000586441 CXorf57Q6NSI4 855 aaKnown RBP12.71□□□□□ -0.37
ERCC2-207ENST00000586441 LRRC31Q6UY01 552 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 ZNF783Q6ZMS7 281 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 STRADAQ7RTN6 431 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 ZNF683Q8IZ20 524 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 VCPIP1Q96JH7 1222 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 HSPA12BQ96MM6 686 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 AGPAT1Q99943 283 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 FEM1AQ9BSK4 669 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 SYT11Q9BT88 431 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 ZDHHC5Q9C0B5 715 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 TKTL2Q9H0I9 626 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 SGK2Q9HBY8 427 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 OSGEPQ9NPF4 335 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 TMEM9BQ9NQ34 198 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 OR51B4Q9Y5P0 310 aa12.71□□□□□ -0.37
ERCC2-207ENST00000586441 PCNX2A6NKB5 2137 aa12.71□□□□□ -0.38
ERCC2-207ENST00000586441 SYNJ2BP-COX16A0A087WUM0 186 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 DCDC2BA2VCK2 349 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 CES2O00748 559 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 CALB1P05937 261 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 SYPP08247 313 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 HLA-EP13747 358 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 CSRP1P21291 193 aaKnown RBP12.7□□□□□ -0.38
ERCC2-207ENST00000586441 RDXP35241 583 aaKnown RBP12.7□□□□□ -0.38
ERCC2-207ENST00000586441 FLT3P36888 993 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 NSFP46459 744 aaKnown RBP12.7□□□□□ -0.38
ERCC2-207ENST00000586441 SULT1E1P49888 294 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 RPS14P62263 151 aaKnown RBP12.7□□□□□ -0.38
ERCC2-207ENST00000586441 NRG1Q02297 640 aaPredicted RBP12.7□□□□□ -0.38
ERCC2-207ENST00000586441 PTP4A2Q12974 167 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 BRD3Q15059 726 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 C9orf64Q5T6V5 341 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 RNF219Q5W0B1 726 aaPredicted RBP12.7□□□□□ -0.38
ERCC2-207ENST00000586441 TCEAL6Q6IPX3 200 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 FBXO38Q6PIJ6 1188 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 ZNF572Q7Z3I7 529 aaPredicted RBP12.7□□□□□ -0.38
ERCC2-207ENST00000586441 APCDD1Q8J025 514 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 SLC20A1Q8WUM9 679 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 CTNNBL1Q8WYA6 563 aaPredicted RBP12.7□□□□□ -0.38
ERCC2-207ENST00000586441 CENPIQ92674 756 aaPredicted RBP12.7□□□□□ -0.38
ERCC2-207ENST00000586441 TCEAL3Q969E4 200 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 IGSF8Q969P0 613 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 OSBPL9Q96SU4 736 aa12.7□□□□□ -0.38
ERCC2-207ENST00000586441 TBCBQ99426 244 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms