RNA–Protein interactions for RNA: ENST00000584620.5

PGAP3-209, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-209ENST00000584620 I6L893 689 aaPredicted RBP11.12□□□□□ -0.63
PGAP3-209ENST00000584620 ATP9BO43861 1147 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 HSF2BPO75031 334 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 RTN2O75298 545 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 FGFR1OPO95684 399 aaKnown RBP11.12□□□□□ -0.63
PGAP3-209ENST00000584620 IL1BP01584 269 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 PNMA6AP0CW24 399 aaPredicted RBP11.12□□□□□ -0.63
PGAP3-209ENST00000584620 SLC2A3P11169 496 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 TFE3P19532 575 aaPredicted RBP11.12□□□□□ -0.63
PGAP3-209ENST00000584620 ABCB4P21439 1286 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 USP8P40818 1118 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 NXPH1P58417 271 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 SULT2A1Q06520 285 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 TARDBPQ13148 414 aaKnown RBP eCLIP11.12□□□□□ -0.63
PGAP3-209ENST00000584620 AUHQ13825 339 aaKnown RBP11.12□□□□□ -0.63
PGAP3-209ENST00000584620 EXOC3L4Q17RC7 722 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 C5orf22Q49AR2 442 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 PTPN20Q4JDL3 420 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 EFHC1Q5JVL4 640 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 COLEC12Q5KU26 742 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 RABGAP1LQ5R372 815 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 TTC39BQ5VTQ0 682 aaPredicted RBP11.12□□□□□ -0.63
PGAP3-209ENST00000584620 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.12□□□□□ -0.63
PGAP3-209ENST00000584620 GBP6Q6ZN66 633 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 SPATS2Q86XZ4 545 aaKnown RBP11.12□□□□□ -0.63
PGAP3-209ENST00000584620 SPACA3Q8IXA5 215 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 C1orf131Q8NDD1 294 aaKnown RBP11.12□□□□□ -0.63
PGAP3-209ENST00000584620 NAF1Q96HR8 494 aaKnown RBP11.12□□□□□ -0.63
PGAP3-209ENST00000584620 SERAC1Q96JX3 654 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 RPRD1AQ96P16 312 aaPredicted RBP11.12□□□□□ -0.63
PGAP3-209ENST00000584620 FEM1AQ9BSK4 669 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 FTSJ1Q9UET6 329 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 SLC12A6Q9UHW9 1150 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 VANGL2Q9ULK5 521 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 PPM1HQ9ULR3 514 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 HS3ST4Q9Y661 456 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 MGAQ8IWI9 3026 aa11.12□□□□□ -0.63
PGAP3-209ENST00000584620 TBC1D3DA0A087WVF3 549 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 TBC1D3IA0A087WXS9 549 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 TBC1D3EA0A087X179 549 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 TBC1D3KA0A087X1G2 549 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 GTPBP10A4D1E9 387 aaKnown RBP11.11□□□□□ -0.63
PGAP3-209ENST00000584620 TBC1D3FA6NER0 549 aaPredicted RBP11.11□□□□□ -0.63
PGAP3-209ENST00000584620 TBC1D3LB9A6J9 549 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 TLR4O00206 839 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 FOXN3O00409 490 aaPredicted RBP11.11□□□□□ -0.63
PGAP3-209ENST00000584620 ENC1O14682 589 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 PLRG1O43660 514 aaKnown RBP11.11□□□□□ -0.63
PGAP3-209ENST00000584620 PAGE1O75459 146 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 DAB1O75553 588 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 CNTN5O94779 1100 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 ADCY5O95622 1261 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 TBC1D3HP0C7X1 549 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 C6P13671 934 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 EPHA8P29322 1005 aaPredicted RBP11.11□□□□□ -0.63
PGAP3-209ENST00000584620 CLCN1P35523 988 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 NNMTP40261 264 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 RXRGP48443 463 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 CNTN1Q12860 1018 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 BNIP3Q12983 259 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 DNAJC3Q13217 504 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 NME3Q13232 169 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 DLG2Q15700 870 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 CAMK4Q16566 473 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 INAVAQ3KP66 663 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 POM121L1PQ3SYA9 428 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 ARHGAP40Q5TG30 622 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 AGBL4Q5VU57 503 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 TBC1D3GQ6DHY5 549 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 OR6B2Q6IFH4 312 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 TBC1D3CQ6IPX1 549 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 C11orf57Q6ZUT1 292 aaPredicted RBP11.11□□□□□ -0.63
PGAP3-209ENST00000584620 Q6ZVU0 165 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 SLC26A9Q7LBE3 791 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 KANSL1Q7Z3B3 1105 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 SLC47A2Q86VL8 602 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 ZNF683Q8IZ20 524 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 TBC1D3Q8IZP1 549 aaPredicted RBP11.11□□□□□ -0.63
PGAP3-209ENST00000584620 SNIP1Q8TAD8 396 aaKnown RBP11.11□□□□□ -0.63
PGAP3-209ENST00000584620 TSC1Q92574 1164 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 FGF11Q92914 225 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 RNF34Q969K3 372 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 SKA1Q96BD8 255 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 FAM81BQ96LP2 452 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 PSMB7Q99436 277 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 TRIM4Q9C037 500 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 KDM4CQ9H3R0 1056 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 CPNE5Q9HCH3 593 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 PLCB1Q9NQ66 1216 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 GDF3Q9NR23 364 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 PIGVQ9NUD9 493 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 TBC1D30Q9Y2I9 924 aa11.11□□□□□ -0.63
PGAP3-209ENST00000584620 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.1□□□□□ -0.63
PGAP3-209ENST00000584620 RNF103O00237 685 aa11.1□□□□□ -0.63
PGAP3-209ENST00000584620 MCF2LO15068 1137 aa11.1□□□□□ -0.63
PGAP3-209ENST00000584620 SLC7A4O43246 635 aa11.1□□□□□ -0.63
PGAP3-209ENST00000584620 BRINP1O60477 761 aa11.1□□□□□ -0.63
PGAP3-209ENST00000584620 CLDN11O75508 207 aa11.1□□□□□ -0.63
PGAP3-209ENST00000584620 LDOC1O95751 146 aaPredicted RBP11.1□□□□□ -0.63
PGAP3-209ENST00000584620 MT-CO1P00395 513 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms