RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 SIRPGQ9P1W8 387 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 KLF11O14901 512 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 PTPN4P29074 926 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 PM20D1Q6GTS8 502 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 DCLRE1AQ6PJP8 1040 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 CD300LGQ6UXG3 332 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 C4orf50Q6ZRC1 276 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 SPATA22Q8NHS9 363 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 SH3TC2Q8TF17 1288 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 MIPEPQ99797 713 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 VCXQ9H320 206 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 ZNF358Q9NW07 568 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 MKS1Q9NXB0 559 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 STOML1Q9UBI4 398 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 FAM155AB1AL88 458 aaPredicted RBP13.94□□□□□ -0.18
SRSF1-205ENST00000582730 PAGE1O75459 146 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 TSC2P49815 1807 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 MAPRE1Q15691 268 aaKnown RBP13.94□□□□□ -0.18
SRSF1-205ENST00000582730 CCDC6Q16204 474 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 IRGCQ6NXR0 463 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 GLB1LQ6UWU2 654 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 ZNF280BQ86YH2 543 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 DCLK2Q8N568 766 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 IPMKQ8NFU5 416 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 ZFAND2BQ8WV99 257 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 CAB39LQ9H9S4 337 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 TRHDEQ9UKU6 1024 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 RAD54BQ9Y620 910 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 ESRRAP11474 423 aaPredicted RBP13.94□□□□□ -0.18
SRSF1-205ENST00000582730 VHLP40337 213 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 DSC3Q14574 896 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 ANKRD20A4Q4UJ75 823 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 KYAT3Q6YP21 454 aaKnown RBP13.94□□□□□ -0.18
SRSF1-205ENST00000582730 TIFABQ6ZNK6 161 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 CYS1Q717R9 158 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 CASP10Q92851 521 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 SKA1Q96BD8 255 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 C7orf26Q96N11 449 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 TLE6Q9H808 572 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 SNX15Q9NRS6 342 aa13.94□□□□□ -0.18
SRSF1-205ENST00000582730 IARS2Q9NSE4 1012 aaKnown RBP13.94□□□□□ -0.18
SRSF1-205ENST00000582730 M0QZQ0 153 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 IRAK2O43187 625 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 B4GALT3O60512 393 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 MT-CYBP00156 380 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-205ENST00000582730 LMNAP02545 664 aaKnown RBP13.93□□□□□ -0.18
SRSF1-205ENST00000582730 CYP11A1P05108 521 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 ALDH18A1P54886 795 aaKnown RBP13.93□□□□□ -0.18
SRSF1-205ENST00000582730 ARPP19P56211 112 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 OCRLQ01968 901 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 CTC1Q2NKJ3 1217 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 SNX30Q5VWJ9 437 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 NRG4Q8WWG1 115 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 NSL1Q96IY1 281 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 FCRL2Q96LA5 508 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-205ENST00000582730 TEKT5Q96M29 485 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 CPNE1Q99829 537 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 BRD8Q9H0E9 1235 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 SAR1AQ9NR31 198 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 MPP6Q9NZW5 540 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 TMEM216Q9P0N5 145 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 EMCNQ9ULC0 261 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 RPL26L1Q9UNX3 145 aaKnown RBP13.93□□□□□ -0.18
SRSF1-205ENST00000582730 LRCH1Q9Y2L9 728 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 GYG2O15488 501 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 RPLP2P05387 115 aaKnown RBP13.93□□□□□ -0.18
SRSF1-205ENST00000582730 ENO1P06733 434 aaKnown RBP13.93□□□□□ -0.18
SRSF1-205ENST00000582730 CCR1P32246 355 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 NUMBP49757 651 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 POLE2P56282 527 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 COG7P83436 770 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 DLG2Q15700 870 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 KCNMB4Q86W47 210 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 MCUR1Q96AQ8 359 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 IFT43Q96FT9 208 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 SUSD3Q96L08 255 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 CADM1Q9BY67 442 aaKnown RBP13.93□□□□□ -0.18
SRSF1-205ENST00000582730 WWP1Q9H0M0 922 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 CASS4Q9NQ75 786 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 ABCC13Q9NSE7 274 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.93□□□□□ -0.182e-6■□□□□ 8.9
SRSF1-205ENST00000582730 DCDC2Q9UHG0 476 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 HBS1LQ9Y450 684 aaKnown RBP13.93□□□□□ -0.18
SRSF1-205ENST00000582730 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-205ENST00000582730 TTC3P53804 2025 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-205ENST00000582730 A0A1W2PQH9 124 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 ITM2AO43736 263 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 PLIN3O60664 434 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 SPRP35270 261 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-205ENST00000582730 GPR15P49685 360 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 CAP1Q01518 475 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 NAB1Q13506 487 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 POU6F1Q14863 301 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 RCN1Q15293 331 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 DDR2Q16832 855 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 FOXB2Q5VYV0 432 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 ZNF354CQ86Y25 554 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 C10orf107Q8IVU9 208 aa13.93□□□□□ -0.18
SRSF1-205ENST00000582730 TNS4Q8IZW8 715 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms