RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 CALN1Q9BXU9 219 aa10.48□□□□□ -0.73
SS18-210ENST00000578700 POPDC2Q9HBU9 364 aa10.48□□□□□ -0.73
SS18-210ENST00000578700 TMEM51Q9NW97 253 aa10.48□□□□□ -0.73
SS18-210ENST00000578700 SMPD4Q9NXE4 827 aa10.48□□□□□ -0.73
SS18-210ENST00000578700 EVLQ9UI08 416 aaPredicted RBP10.48□□□□□ -0.73
SS18-210ENST00000578700 MYOFQ9NZM1 2061 aa10.48□□□□□ -0.73
SS18-210ENST00000578700 CELSR3Q9NYQ7 3312 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 ADAMTS9Q9P2N4 1935 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 hCG_1818297A0A087WSY0 165 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 TCRBV21S2A2A0A5A6 115 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 TAF4O00268 1085 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 TNFRSF10BO14763 440 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 OPHN1O60890 802 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 F9P00740 461 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 BDNFP23560 247 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 KDELR1P24390 212 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 CDKN2BP42772 138 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 CDH6P55285 790 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 FAM193AP78312 1265 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 MRPS25P82663 173 aaKnown RBP10.47□□□□□ -0.73
SS18-210ENST00000578700 ZXDBP98169 803 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 KDSRQ06136 332 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 MESP2Q0VG99 397 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 IFRD2Q12894 506 aaPredicted RBP10.47□□□□□ -0.73
SS18-210ENST00000578700 CALCOCO2Q13137 446 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 NNTQ13423 1086 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 BYSLQ13895 437 aaKnown RBP10.47□□□□□ -0.73
SS18-210ENST00000578700 DHCR24Q15392 516 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 SMTNL2Q2TAL5 461 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 ARL13BQ3SXY8 428 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 SLC25A52Q3SY17 297 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 DCAF6Q58WW2 860 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 EOGTQ5NDL2 527 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 BEND6Q5SZJ8 279 aaPredicted RBP10.47□□□□□ -0.73
SS18-210ENST00000578700 VSTM1Q6UX27 236 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 MFSD7Q6UXD7 560 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 PAQR9Q6ZVX9 377 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 RFX6Q8HWS3 928 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 ADGRG2Q8IZP9 1017 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 NAT16Q8N8M0 369 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 IL17RCQ8NAC3 791 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 BBOF1Q8ND07 529 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 OR2I1PQ8NGU4 316 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 C1orf54Q8WWF1 131 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 FUBP3Q96I24 572 aaKnown RBP eCLIP10.47□□□□□ -0.73
SS18-210ENST00000578700 MYRFLQ96LU7 910 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 SMOQ99835 787 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 FAM129AQ9BZQ8 928 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 CSNK1G1Q9HCP0 422 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.47□□□□□ -0.73
SS18-210ENST00000578700 KLHL11Q9NVR0 708 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 TRPM5Q9NZQ8 1165 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 MTRF1LQ9UGC7 380 aaKnown RBP10.47□□□□□ -0.73
SS18-210ENST00000578700 NFU1Q9UMS0 254 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 ARHGAP26Q9UNA1 814 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 CPQQ9Y646 472 aa10.47□□□□□ -0.73
SS18-210ENST00000578700 TRIM66O15016 1216 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 SEC31AO94979 1220 aaKnown RBP10.46□□□□□ -0.73
SS18-210ENST00000578700 KAT7O95251 611 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 LTFP02788 710 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 CYP17A1P05093 508 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 ZFXP17010 805 aaPredicted RBP10.46□□□□□ -0.73
SS18-210ENST00000578700 WASP42768 502 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 DAOAP59103 153 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 RPL6Q02878 288 aaKnown RBP10.46□□□□□ -0.73
SS18-210ENST00000578700 SEMA3BQ13214 749 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 SNX1Q13596 522 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 LLGL1Q15334 1064 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 TAF5Q15542 800 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 DUOXA1Q1HG43 343 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 C15orf59Q2T9L4 293 aaPredicted RBP10.46□□□□□ -0.73
SS18-210ENST00000578700 GAB4Q2WGN9 574 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 ATP13A4Q4VNC1 1196 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 HSP90B2PQ58FF3 399 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 RAB41Q5JT25 222 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 KCNT1Q5JUK3 1230 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 ERMARDQ5T6L9 678 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 SLC23A3Q6PIS1 610 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 BBS12Q6ZW61 710 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 C12orf40Q86WS4 652 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 VSIG1Q86XK7 387 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 PSTKQ8IV42 348 aaKnown RBP10.46□□□□□ -0.73
SS18-210ENST00000578700 DEFB106AQ8N104 65 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 SCML4Q8N228 414 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 ARHGAP18Q8N392 663 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 CCDC89Q8N998 374 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 CASKIN2Q8WXE0 1202 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 RAPGEF5Q92565 580 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 SLCO2A1Q92959 643 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 LRRC45Q96CN5 670 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 CAMK1GQ96NX5 476 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 RUFY1Q96T51 708 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 ULBP1Q9BZM6 244 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 DCLK3Q9C098 648 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 RNF38Q9H0F5 515 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 DPH5Q9H2P9 285 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 VIPAS39Q9H9C1 493 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 PRDM16Q9HAZ2 1276 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 ARHGEF4Q9NR80 690 aa10.46□□□□□ -0.73
SS18-210ENST00000578700 ASIC3Q9UHC3 531 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms