RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 SUV39H2Q9H5I1 410 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 POMKQ9H5K3 350 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 CATSPERBQ9H7T0 1116 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 SRA1Q9HD15 236 aaKnown RBP8.24□□□□□ -1.09
COPS3-215ENST00000578317 RRAGDQ9NQL2 400 aaPredicted RBP8.24□□□□□ -1.09
COPS3-215ENST00000578317 ARHGEF4Q9NR80 690 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 NEU3Q9UQ49 428 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 USP15Q9Y4E8 981 aaPredicted RBP8.24□□□□□ -1.09
COPS3-215ENST00000578317 RAD54BQ9Y620 910 aa8.24□□□□□ -1.09
COPS3-215ENST00000578317 MTCL1Q9Y4B5 1905 aaKnown RBP8.24□□□□□ -1.09
COPS3-215ENST00000578317 GREB1Q4ZG55 1949 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 F5H5T6 163 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 PDE2AO00408 941 aaPredicted RBP8.23□□□□□ -1.09
COPS3-215ENST00000578317 DCLK1O15075 740 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 MBTPS2O43462 519 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 CREB3O43889 395 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 CST8O60676 142 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 KRT10P13645 584 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 ERCC2P18074 760 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 TACR2P21452 398 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 TGM2P21980 687 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 KCNA5P22460 613 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 CES1P23141 567 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 FCARP24071 287 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 GJC1P36383 396 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 TPI1P60174 286 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 ADCY2Q08462 1091 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 FCHO2Q0JRZ9 810 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 SIX1Q15475 284 aaPredicted RBP8.23□□□□□ -1.09
COPS3-215ENST00000578317 CCNG2Q16589 344 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 CYP1B1Q16678 543 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 LONRF2Q1L5Z9 754 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 LEXMQ3ZCV2 418 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 RABGAP1LQ5R372 815 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 DRICH1Q6PGQ1 229 aaPredicted RBP8.23□□□□□ -1.09
COPS3-215ENST00000578317 EP400NLQ6ZTU2 488 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 BZW1Q7L1Q6 419 aaKnown RBP8.23□□□□□ -1.09
COPS3-215ENST00000578317 GET4Q7L5D6 327 aaPredicted RBP8.23□□□□□ -1.09
COPS3-215ENST00000578317 NLRP14Q86W24 1093 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 LRRC49Q8IUZ0 686 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 MFSD6LQ8IWD5 586 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 ZDHHC14Q8IZN3 488 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 RTL3Q8N8U3 475 aaKnown RBP8.23□□□□□ -1.09
COPS3-215ENST00000578317 SPATA4Q8NEY3 305 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 RIN3Q8TB24 985 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 NXPE3Q969Y0 559 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 ELSPBP1Q96BH3 223 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 TBC1D31Q96DN5 1066 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 TMA16Q96EY4 203 aaKnown RBP8.23□□□□□ -1.09
COPS3-215ENST00000578317 MYADMQ96S97 322 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 HERPUD2Q9BSE4 406 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 HEMGNQ9BXL5 484 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 ZYG11BQ9C0D3 744 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 SMG9Q9H0W8 520 aaKnown RBP8.23□□□□□ -1.09
COPS3-215ENST00000578317 ZFP14Q9HCL3 533 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 KLHL11Q9NVR0 708 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 TMEM248Q9NWD8 314 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 CDH22Q9UJ99 828 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 VANGL2Q9ULK5 521 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 SNX10Q9Y5X0 201 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 VCANP13611 3396 aa8.23□□□□□ -1.09
COPS3-215ENST00000578317 GOLGA6L7A0A1B0GV03 622 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 ANHXE9PGG2 379 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 H3BQ06 376 aaPredicted RBP8.22□□□□□ -1.09
COPS3-215ENST00000578317 APOC4-APOC2K7ER74 178 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 APOL1O14791 398 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 NCAM2O15394 837 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 DAPK3O43293 454 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 CLDN11O75508 207 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 ECI2O75521 394 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 APOC2P02655 101 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 IRF1P10914 325 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 AMPD1P23109 780 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 GSTT1P30711 240 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 SLC6A4P31645 630 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 DNAJA1P31689 397 aaKnown RBP8.22□□□□□ -1.09
COPS3-215ENST00000578317 NDST2P52849 883 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 CDH4P55283 916 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 TUBB4BP68371 445 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 ZNF33AQ06730 810 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 CKAP4Q07065 602 aaKnown RBP8.22□□□□□ -1.09
COPS3-215ENST00000578317 UBAP2LQ14157 1087 aaKnown RBP8.22□□□□□ -1.09
COPS3-215ENST00000578317 GRM2Q14416 872 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 CCDC85BQ15834 202 aaPredicted RBP8.22□□□□□ -1.09
COPS3-215ENST00000578317 MPPE1Q53F39 396 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 CCDC181Q5TID7 509 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 RAP1GAP2Q684P5 730 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 TANGO2Q6ICL3 276 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 MTSS1LQ765P7 747 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 CHST9Q7L1S5 443 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 CHSY1Q86X52 802 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 BBS7Q8IWZ6 715 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 UMODL1-AS1Q8N2C9 162 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 CEP112Q8N8E3 955 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 PRELID2Q8N945 189 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 ZNF557Q8N988 423 aaPredicted RBP8.22□□□□□ -1.09
COPS3-215ENST00000578317 MNS1Q8NEH6 495 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 BPIFB1Q8TDL5 484 aa8.22□□□□□ -1.09
COPS3-215ENST00000578317 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.22□□□□□ -1.09
COPS3-215ENST00000578317 DEPDC1BQ8WUY9 529 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms