RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, human

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC57-211	ENST00000578187	BCAT2	O15382	392 aa	Predicted RBP	13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	RNASEH1	O60930	286 aa	Known RBP	13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	KRT37	O76014	449 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	MOCS3	O95396	460 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	CER1	O95813	267 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	PROS1	P07225	676 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	DLD	P09622	509 aa	Known RBP	13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	ADRA1B	P35368	520 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	EIF4A3	P38919	411 aa	Known RBP	13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	ZNF75D	P51815	510 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	COPA	P53621	1224 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	ADK	P55263	362 aa	Known RBP	13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	ZBTB16	Q05516	673 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	CAMK2G	Q13555	558 aa	Predicted RBP	13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	SLC18A3	Q16572	532 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	ASTE1	Q2TB18	679 aa	Predicted RBP	13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	ARL13B	Q3SXY8	428 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	PITRM1	Q5JRX3	1037 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	MANEAL	Q5VSG8	457 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	MBLAC2	Q68D91	279 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	ALKBH5	Q6P6C2	394 aa	Known RBP	13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	PIP4P1	Q86T03	277 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	FAM124A	Q86V42	546 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	CNGA4	Q8IV77	575 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	ZCCHC9	Q8N567	271 aa	Known RBP	13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	CCDC185	Q8N715	623 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	CYB5D2	Q8WUJ1	264 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	DNASE2B	Q8WZ79	361 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	SNX19	Q92543	992 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	TTC17	Q96AE7	1141 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	INTS6	Q9UL03	887 aa	Known RBP	13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	NCKAP1	Q9Y2A7	1128 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	SNX10	Q9Y5X0	201 aa		13.13	□□□□□ -0.31
CCDC57-211	ENST00000578187	METTL12	A8MUP2	240 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187		E9PAM4	449 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	CLDN11	O75508	207 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	ASL	P04424	464 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	HLA-E	P13747	358 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	MAOB	P27338	520 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	AIF1	P55008	147 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	CDH4	P55283	916 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	OXCT1	P55809	520 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	GRIK2	Q13002	908 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	SLC12A1	Q13621	1099 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	TEAD4	Q15561	434 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	PTPRN	Q16849	979 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	ZNF423	Q2M1K9	1284 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	ALF	Q53S48	1182 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	RNF219	Q5W0B1	726 aa	Predicted RBP	13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	LRRC31	Q6UY01	552 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	TC2N	Q8N9U0	490 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	SCNM1	Q9BWG6	230 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	BTBD1	Q9H0C5	482 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	THAP2	Q9H0W7	228 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	OSBPL2	Q9H1P3	480 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	TMEM245	Q9H330	911 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	MRPL47	Q9HD33	250 aa	Known RBP	13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	ZNF212	Q9UDV6	495 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	SCML1	Q9UN30	329 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	NEU3	Q9UQ49	428 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	TBC1D30	Q9Y2I9	924 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	PCDH15	Q96QU1	1955 aa		13.12	□□□□□ -0.31
CCDC57-211	ENST00000578187	ADAMTS9	Q9P2N4	1935 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	SPAAR	A0A1B0GVQ0	90 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	CNTN5	O94779	1100 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	CYP1A2	P05177	515 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	DES	P17661	470 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	PSMA2	P25787	234 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	CSK	P41240	450 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	AFF3	P51826	1226 aa	Known RBP	13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	PLK1	P53350	603 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	TSR1	Q2NL82	804 aa	Known RBP	13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	CCDC122	Q5T0U0	273 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	ZNF776	Q68DI1	518 aa	Predicted RBP	13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	SLFN11	Q7Z7L1	901 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	NAXD	Q8IW45	347 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	OR52K2	Q8NGK3	314 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	GANC	Q8TET4	914 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	ALG14	Q96F25	216 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	MYO19	Q96H55	970 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	CHP1	Q99653	195 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	ANP32E	Q9BTT0	268 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	TRIM7	Q9C029	511 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	ZYG11B	Q9C0D3	744 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	MYO1A	Q9UBC5	1043 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	OR12D3	Q9UGF7	316 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	EIF2B4	Q9UI10	523 aa	Known RBP	13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	NEUROG3	Q9Y4Z2	214 aa		13.11	□□□□□ -0.31
CCDC57-211	ENST00000578187	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.1	□□□□□ -0.31
CCDC57-211	ENST00000578187	SEMA4F	O95754	770 aa		13.1	□□□□□ -0.31
CCDC57-211	ENST00000578187	CD59	P13987	128 aa		13.1	□□□□□ -0.31
CCDC57-211	ENST00000578187	MZF1	P28698	734 aa	Predicted RBP	13.1	□□□□□ -0.31
CCDC57-211	ENST00000578187	NNMT	P40261	264 aa		13.1	□□□□□ -0.31
CCDC57-211	ENST00000578187	GALC	P54803	685 aa		13.1	□□□□□ -0.31
CCDC57-211	ENST00000578187	ZNF177	Q13360	481 aa	Predicted RBP	13.1	□□□□□ -0.31
CCDC57-211	ENST00000578187	SUZ12	Q15022	739 aa	Known RBP	13.1	□□□□□ -0.31

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