RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 CYP2W1Q8TAV3 490 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 ADAM32Q8TC27 787 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 C1orf54Q8WWF1 131 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 CCDC126Q96EE4 140 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 ZHX1-C8orf76Q96EF9 292 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 MAGED4Q96JG8 741 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 BRINP2Q9C0B6 783 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.98□□□□□ -1.933e-7■■■■□ 21.5
SMCHD1-203ENST00000577880 KCTD10Q9H3F6 313 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 NXF3Q9H4D5 531 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 RMND5AQ9H871 391 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 CNGB3Q9NQW8 809 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 TDP1Q9NUW8 608 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 GALNT8Q9NY28 637 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 RAD54BQ9Y620 910 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 RPS6KL1Q9Y6S9 549 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 SDK1Q7Z5N4 2213 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 KCPQ6ZWJ8 1503 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 C1orf232A0A0U1RR37 186 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 MAGEB16A2A368 324 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 TMEM114B3SHH9 223 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 GOLGA8KD6RF30 607 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 DIAPH2O60879 1101 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 SLITRK3O94933 977 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 ALPIP09923 528 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 MYL2P10916 166 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 KRT4P19013 534 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 HLA-DPA1P20036 260 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 CYP3A5P20815 502 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 U2AF2P26368 475 aaKnown RBP eCLIP2.98□□□□□ -1.937e-7■■■□□ 16.1
SMCHD1-203ENST00000577880 ACTR1BP42025 376 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 AVPR1BP47901 424 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 CARSP49589 748 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 CCR3P51677 355 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 ACTR1AP61163 376 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 ETF1P62495 437 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 FMR1Q06787 632 aaKnown RBP eCLIP2.98□□□□□ -1.933e-7■■■■■ 70.1
SMCHD1-203ENST00000577880 STK4Q13043 487 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 CAPSQ13938 189 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 DHX34Q14147 1143 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 SF1Q15637 639 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 TMEM31Q5JXX7 168 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 BRMS1LQ5PSV4 323 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 MLIPQ5VWP3 458 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 CCDC137Q6PK04 289 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 PAOXQ6QHF9 649 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 PAGE2Q7Z2X7 111 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 FAM35AQ86V20 835 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 PIGZQ86VD9 579 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 CYP4Z1Q86W10 505 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 SRFBP1Q8NEF9 429 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 B4GALNT2Q8NHY0 566 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 NPLOC4Q8TAT6 608 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 LMX1AQ8TE12 382 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 TAS1R2Q8TE23 839 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 WHAMMQ8TF30 809 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 LCN9Q8WX39 176 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 FAM3CQ92520 227 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 TM9SF4Q92544 642 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 ZFYVE19Q96K21 471 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 BTN2A3PQ96KV6 586 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 C3orf14Q9HBI5 128 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 CYLDQ9NQC7 956 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 WBP1LQ9NX94 342 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 FBXL12Q9NXK8 326 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 TAS2R13Q9NYV9 303 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 SIRPGQ9P1W8 387 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 KLQ9UEF7 1012 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 OR12D3Q9UGF7 316 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 XPO7Q9UIA9 1087 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 HEBP2Q9Y5Z4 205 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 INO80Q9ULG1 1556 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 LAMB4A4D0S4 1761 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 A0A1W2PQC6 194 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 FAM221BA6H8Z2 402 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 FAM205CA6NFA0 338 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 FAM170BA6NMN3 283 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 SLC38A8A6NNN8 435 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 MYO1GB0I1T2 1018 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 RASA4BC9J798 803 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 FAM86B1E9PN63 330 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 AXIN1O15169 862 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 RASA4O43374 803 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 SGTAO43765 313 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 C1RP00736 705 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 LMNAP02545 664 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 SOD2P04179 222 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 PLEKP08567 350 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 RBP1P09455 135 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 FAM86B2P0C5J1 330 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 UMPSP11172 480 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 TAL1P17542 331 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 PSMC3P17980 439 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 EEF1B2P24534 225 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 ICAM3P32942 547 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 EPHB4P54760 987 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 GALCP54803 685 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 RIPPLY3P57055 190 aa2.98□□□□□ -1.93
SMCHD1-203ENST00000577880 ZNF200P98182 395 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms