RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 CSNK1G1Q9HCP0 422 aa10.47□□□□□ -0.73
SS18-207ENST00000577636 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.47□□□□□ -0.73
SS18-207ENST00000577636 KLHL11Q9NVR0 708 aa10.47□□□□□ -0.73
SS18-207ENST00000577636 TRPM5Q9NZQ8 1165 aa10.47□□□□□ -0.73
SS18-207ENST00000577636 MTRF1LQ9UGC7 380 aaKnown RBP10.47□□□□□ -0.73
SS18-207ENST00000577636 NFU1Q9UMS0 254 aa10.47□□□□□ -0.73
SS18-207ENST00000577636 ARHGAP26Q9UNA1 814 aa10.47□□□□□ -0.73
SS18-207ENST00000577636 CPQQ9Y646 472 aa10.47□□□□□ -0.73
SS18-207ENST00000577636 LAMA1P25391 3075 aa10.47□□□□□ -0.73
SS18-207ENST00000577636 ASPMQ8IZT6 3477 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 FAM208BQ5VWN6 2430 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 TRIM66O15016 1216 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 SEC31AO94979 1220 aaKnown RBP10.46□□□□□ -0.73
SS18-207ENST00000577636 KAT7O95251 611 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 LTFP02788 710 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 CYP17A1P05093 508 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 ZFXP17010 805 aaPredicted RBP10.46□□□□□ -0.73
SS18-207ENST00000577636 WASP42768 502 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 DAOAP59103 153 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 RPL6Q02878 288 aaKnown RBP10.46□□□□□ -0.73
SS18-207ENST00000577636 SEMA3BQ13214 749 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 SNX1Q13596 522 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 LLGL1Q15334 1064 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 TAF5Q15542 800 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 DUOXA1Q1HG43 343 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 C15orf59Q2T9L4 293 aaPredicted RBP10.46□□□□□ -0.73
SS18-207ENST00000577636 GAB4Q2WGN9 574 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 ATP13A4Q4VNC1 1196 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 HSP90B2PQ58FF3 399 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 RAB41Q5JT25 222 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 KCNT1Q5JUK3 1230 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 ERMARDQ5T6L9 678 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 SLC23A3Q6PIS1 610 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 BBS12Q6ZW61 710 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 C12orf40Q86WS4 652 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 VSIG1Q86XK7 387 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 PSTKQ8IV42 348 aaKnown RBP10.46□□□□□ -0.73
SS18-207ENST00000577636 DEFB106AQ8N104 65 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 SCML4Q8N228 414 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 ARHGAP18Q8N392 663 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 CCDC89Q8N998 374 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 CASKIN2Q8WXE0 1202 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 RAPGEF5Q92565 580 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 SLCO2A1Q92959 643 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 LRRC45Q96CN5 670 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 CAMK1GQ96NX5 476 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 RUFY1Q96T51 708 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 ULBP1Q9BZM6 244 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 DCLK3Q9C098 648 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 RNF38Q9H0F5 515 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 DPH5Q9H2P9 285 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 VIPAS39Q9H9C1 493 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 PRDM16Q9HAZ2 1276 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 ARHGEF4Q9NR80 690 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 ASIC3Q9UHC3 531 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 SLC6A14Q9UN76 642 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 ZNF148Q9UQR1 794 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 PCDHB9Q9Y5E1 797 aa10.46□□□□□ -0.73
SS18-207ENST00000577636 MYH10P35580 1976 aa10.46□□□□□ -0.74
SS18-207ENST00000577636 NUP205Q92621 2012 aa10.46□□□□□ -0.74
SS18-207ENST00000577636 ATRXP46100 2492 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 TCRBV7S2A1N4TA0A589 114 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 ESYT3A0FGR9 886 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 TBC1D3BA6NDS4 549 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 ZNF487B1APH4 448 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 MCF2LO15068 1137 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 MDM4O15151 490 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 DAPK3O43293 454 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 BEST1O76090 585 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 MBL2P11226 248 aaPredicted RBP10.45□□□□□ -0.74
SS18-207ENST00000577636 KRT10P13645 584 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 TCF4P15884 667 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 IL1R2P27930 398 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 ARL4AP40617 200 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 CARSP49589 748 aaKnown RBP10.45□□□□□ -0.74
SS18-207ENST00000577636 AIF1P55008 147 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 DRG2P55039 364 aaKnown RBP10.45□□□□□ -0.74
SS18-207ENST00000577636 USP46P62068 366 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 DYNLT1P63172 113 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 CAV1Q03135 178 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 DEUP1Q05D60 604 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 SCAPQ12770 1279 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 KLF1Q13351 362 aaPredicted RBP10.45□□□□□ -0.74
SS18-207ENST00000577636 CASP8Q14790 479 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 MAP7D1Q3KQU3 841 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 DRICH1Q6PGQ1 229 aaPredicted RBP10.45□□□□□ -0.74
SS18-207ENST00000577636 RHBDF2Q6PJF5 856 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 CEP128Q6ZU80 1094 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 DENND5BQ6ZUT9 1274 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 PIP4P1Q86T03 277 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 RGL4Q8IZJ4 473 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 MINDY1Q8N5J2 469 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 ARFGAP1Q8N6T3 406 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 GOLGA6L1Q8N7Z2 621 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 PNPLA1Q8N8W4 532 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 CEP76Q8TAP6 659 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 AENQ8WTP8 325 aaKnown RBP10.45□□□□□ -0.74
SS18-207ENST00000577636 CLEC4CQ8WTT0 213 aa10.45□□□□□ -0.74
SS18-207ENST00000577636 CENPIQ92674 756 aaPredicted RBP10.45□□□□□ -0.74
SS18-207ENST00000577636 CAVIN3Q969G5 261 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms