RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 NPNTQ6UXI9 565 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 Q6ZS52 159 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 CCDC105Q8IYK2 499 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 FBXL6Q8N531 539 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 LZTR1Q8N653 840 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 PLD5Q8N7P1 536 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 DCAF4L2Q8NA75 395 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.77□□□□□ -1.01
NUP88-211ENST00000575976 HMCESQ96FZ2 354 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 ACOX2Q99424 681 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 HERPUD2Q9BSE4 406 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 HEMGNQ9BXL5 484 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 TLR10Q9BXR5 811 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 ACE2Q9BYF1 805 aaPredicted RBP8.77□□□□□ -1.01
NUP88-211ENST00000575976 OSBPL6Q9BZF3 934 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 LRRC19Q9H756 370 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 ATP13A1Q9HD20 1204 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 SIT1Q9Y3P8 196 aa8.77□□□□□ -1.01
NUP88-211ENST00000575976 PTPRZ1P23471 2315 aaPredicted RBP8.77□□□□□ -1.01
NUP88-211ENST00000575976 MIA3Q5JRA6 1907 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 KIAA1549LQ6ZVL6 1849 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 DOCK4Q8N1I0 1966 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 CBX4O00257 560 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 DFFAO00273 331 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 KDELR3O43731 214 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 MFSD11O43934 449 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 CST8O60676 142 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 ZMPSTE24O75844 475 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 MAP3K6O95382 1288 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 ASLP04424 464 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 ATP1A1P05023 1023 aaKnown RBP8.76□□□□□ -1.01
NUP88-211ENST00000575976 ATP5BP06576 529 aaKnown RBP8.76□□□□□ -1.01
NUP88-211ENST00000575976 DLDP09622 509 aaKnown RBP8.76□□□□□ -1.01
NUP88-211ENST00000575976 HNRNPLP14866 589 aaKnown RBP eCLIP8.76□□□□□ -1.01
NUP88-211ENST00000575976 ZFXP17010 805 aaPredicted RBP8.76□□□□□ -1.01
NUP88-211ENST00000575976 ETFBP38117 255 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 WASP42768 502 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 ID4P47928 161 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 STK19P49842 368 aaPredicted RBP8.76□□□□□ -1.01
NUP88-211ENST00000575976 DYNLT1P63172 113 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 MRPS21P82921 87 aaKnown RBP8.76□□□□□ -1.01
NUP88-211ENST00000575976 ARF5P84085 180 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 ECT2LQ008S8 904 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 GBE1Q04446 702 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 SLC10A2Q12908 348 aaPredicted RBP8.76□□□□□ -1.01
NUP88-211ENST00000575976 TFDP2Q14188 446 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 GAS6Q14393 721 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 ZNF234Q14588 700 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 PTPRNQ16849 979 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 PARP15Q460N3 678 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 C2orf27AQ580R0 203 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 PKN3Q6P5Z2 889 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 ARHGAP36Q6ZRI8 547 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 ZNF354CQ86Y25 554 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 SYNPOQ8N3V7 929 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 CCDC33Q8N5R6 958 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 ZNF513Q8N8E2 541 aaPredicted RBP8.76□□□□□ -1.01
NUP88-211ENST00000575976 USP33Q8TEY7 942 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 UCMAQ8WVF2 138 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 CLDN23Q96B33 292 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 MYO19Q96H55 970 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 RPL10LQ96L21 214 aaKnown RBP8.76□□□□□ -1.01
NUP88-211ENST00000575976 MRGPRX3Q96LB0 322 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 OSBPL8Q9BZF1 889 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 THAP10Q9P2Z0 257 aaPredicted RBP8.76□□□□□ -1.01
NUP88-211ENST00000575976 VPS51Q9UID3 782 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 ERVW-1Q9UQF0 538 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 JRKLQ9Y4A0 524 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 ACTL7AQ9Y615 435 aa8.76□□□□□ -1.01
NUP88-211ENST00000575976 TECTAO75443 2155 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 ARHGAP42A6NI28 874 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 WASH3PC4AMC7 463 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 PROB1E7EW31 1015 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 J3KR12 359 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 KCNK3O14649 394 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 KLF8O95600 359 aaPredicted RBP8.75□□□□□ -1.01
NUP88-211ENST00000575976 CD160O95971 181 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 MT-CO1P00395 513 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 SRPRAP08240 638 aaKnown RBP8.75□□□□□ -1.01
NUP88-211ENST00000575976 PECAM1P16284 738 aaPredicted RBP8.75□□□□□ -1.01
NUP88-211ENST00000575976 AOC1P19801 751 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 MSNP26038 577 aaKnown RBP8.75□□□□□ -1.01
NUP88-211ENST00000575976 CXCR5P32302 372 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 PTPN7P35236 360 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 SERPINB6P35237 376 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 CETN2P41208 172 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 IL12RB1P42701 662 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 CLCN5P51795 746 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 SULT2A1Q06520 285 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 SERINC3Q13530 473 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 SEL1L2Q5TEA6 688 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 LINGO4Q6UY18 593 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 LEKR1Q6ZMV7 388 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 BBS12Q6ZW61 710 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 CHPFQ8IZ52 775 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 ALLCQ8N6M5 410 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 TMEM105Q8N8V8 129 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 IL17RCQ8NAC3 791 aa8.75□□□□□ -1.01
NUP88-211ENST00000575976 TXNDC5Q8NBS9 432 aaKnown RBP8.75□□□□□ -1.01
NUP88-211ENST00000575976 RPLP0P6Q8NHW5 317 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms