RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 DNTTP04053 509 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 VAV1P15498 845 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 TGM1P22735 817 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 HNRNPH3P31942 346 aaKnown RBP13.58□□□□□ -0.23
RPAIN-216ENST00000575599 CYLC1P35663 651 aaPredicted RBP13.58□□□□□ -0.23
RPAIN-216ENST00000575599 RPS14P62263 151 aaKnown RBP13.58□□□□□ -0.23
RPAIN-216ENST00000575599 KRT83P78385 493 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 CSRP2Q16527 193 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 C9orf64Q5T6V5 341 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 LYSMD4Q5XG99 296 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 ZNF776Q68DI1 518 aaPredicted RBP13.58□□□□□ -0.23
RPAIN-216ENST00000575599 METTL3Q86U44 580 aaKnown RBP13.58□□□□□ -0.23
RPAIN-216ENST00000575599 DCAF4L2Q8NA75 395 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 PIGKQ92643 395 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 TOE1Q96GM8 510 aaKnown RBP13.58□□□□□ -0.23
RPAIN-216ENST00000575599 EPAS1Q99814 870 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 SPON2Q9BUD6 331 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 ATP13A1Q9HD20 1204 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 ITM2CQ9NQX7 267 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 ZNF212Q9UDV6 495 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 PCSK1NQ9UHG2 260 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 DNAI1Q9UI46 699 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 VPS51Q9UID3 782 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 NEU3Q9UQ49 428 aa13.58□□□□□ -0.23
RPAIN-216ENST00000575599 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.58□□□□□ -0.23
RPAIN-216ENST00000575599 ILVBLA1L0T0 632 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 BCLAF3A2AJT9 711 aaKnown RBP13.58□□□□□ -0.24
RPAIN-216ENST00000575599 TARSL2A2RTX5 802 aaKnown RBP13.58□□□□□ -0.24
RPAIN-216ENST00000575599 CBX4O00257 560 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 ARHGAP6O43182 974 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 AKR1B10O60218 316 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 BNIP3LO60238 219 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 RNASEH1O60930 286 aaKnown RBP13.58□□□□□ -0.24
RPAIN-216ENST00000575599 RNF8O76064 485 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 RHOQP17081 205 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 GLDCP23378 1020 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 EPHB2P29323 1055 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 L1CAMP32004 1257 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 MAPKAPK2P49137 400 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 AIF1P55008 147 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 GNA12Q03113 381 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 SF3A2Q15428 464 aaKnown RBP13.58□□□□□ -0.24
RPAIN-216ENST00000575599 TTC31Q49AM3 519 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-216ENST00000575599 DAB2IPQ5VWQ8 1189 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 IL31Q6EBC2 164 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 LINGO4Q6UY18 593 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 PRR23CQ6ZRP0 262 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 NLRP14Q86W24 1093 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 MMAAQ8IVH4 418 aaKnown RBP13.58□□□□□ -0.24
RPAIN-216ENST00000575599 STK40Q8N2I9 435 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 C12orf50Q8NA57 414 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-216ENST00000575599 ATP11CQ8NB49 1132 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 GANCQ8TET4 914 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 FNIP1Q8TF40 1166 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 PTPRN2Q92932 1015 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 ARHGEF26Q96DR7 871 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 HSPA12BQ96MM6 686 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 PEBP4Q96S96 227 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 NUP85Q9BW27 656 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 GPR174Q9BXC1 333 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 RSPH9Q9H1X1 276 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-216ENST00000575599 NHEJ1Q9H9Q4 299 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-216ENST00000575599 NDFIP2Q9NV92 336 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 AP4E1Q9UPM8 1137 aa13.58□□□□□ -0.24
RPAIN-216ENST00000575599 CEP192Q8TEP8 1941 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 GVINP1Q7Z2Y8 2422 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 CFAP54Q96N23 3096 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 FRYLO94915 3013 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 NUP205Q92621 2012 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 PRPSAP2O60256 369 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 MT-CO1P00395 513 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 SRCP12931 536 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 ITPKAP23677 461 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 MIPP30301 263 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 OXTRP30559 389 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 PSMD8P48556 350 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 GALCP54803 685 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 TPI1P60174 286 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 LMNB2Q03252 620 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 ZNF33AQ06730 810 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 ELAVL3Q14576 367 aaKnown RBP13.57□□□□□ -0.24
RPAIN-216ENST00000575599 SPA17Q15506 151 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 DLG2Q15700 870 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 SLC18A3Q16572 532 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 TCEAL6Q6IPX3 200 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 ZNF783Q6ZMS7 281 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 Q6ZVU0 165 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 ZNF354CQ86Y25 554 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 SLC41A1Q8IVJ1 513 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 CCDC170Q8IYT3 715 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 SH2D3CQ8N5H7 860 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 ARFGAP1Q8N6T3 406 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 FRS2Q8WU20 508 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 TCEAL3Q969E4 200 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 BTBD6Q96KE9 485 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 CHP1Q99653 195 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 SNRNP25Q9BV90 132 aaKnown RBP13.57□□□□□ -0.24
RPAIN-216ENST00000575599 DHX35Q9H5Z1 703 aaKnown RBP13.57□□□□□ -0.24
RPAIN-216ENST00000575599 VPS45Q9NRW7 570 aa13.57□□□□□ -0.24
RPAIN-216ENST00000575599 TMEM248Q9NWD8 314 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms