RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 DFFAO00273 331 aa16.64■□□□□ 0.25
PFN1-203ENST00000574872 NPC1O15118 1278 aa16.64■□□□□ 0.25
PFN1-203ENST00000574872 MT-CO1P00395 513 aa16.64■□□□□ 0.25
PFN1-203ENST00000574872 ETFBP38117 255 aa16.64■□□□□ 0.25
PFN1-203ENST00000574872 LLGL1Q15334 1064 aa16.64■□□□□ 0.25
PFN1-203ENST00000574872 ANKRD20A8PQ5CZ79 823 aa16.64■□□□□ 0.25
PFN1-203ENST00000574872 HEATR6Q6AI08 1181 aaKnown RBP16.64■□□□□ 0.25
PFN1-203ENST00000574872 ANO7Q6IWH7 933 aa16.64■□□□□ 0.25
PFN1-203ENST00000574872 TMCO3Q6UWJ1 677 aa16.64■□□□□ 0.25
PFN1-203ENST00000574872 PEX26Q7Z412 305 aa16.64■□□□□ 0.25
PFN1-203ENST00000574872 TP53INP2Q8IXH6 220 aa16.64■□□□□ 0.25
PFN1-203ENST00000574872 UMODL1-AS1Q8N2C9 162 aa16.64■□□□□ 0.25
PFN1-203ENST00000574872 PCDH19Q8TAB3 1148 aa16.64■□□□□ 0.25
PFN1-203ENST00000574872 SLC39A8Q9C0K1 460 aa16.64■□□□□ 0.25
PFN1-203ENST00000574872 KLC2Q9H0B6 622 aa16.64■□□□□ 0.25
PFN1-203ENST00000574872 MAGEH1Q9H213 219 aa16.64■□□□□ 0.25
PFN1-203ENST00000574872 DDX56Q9NY93 547 aaKnown RBP16.64■□□□□ 0.25
PFN1-203ENST00000574872 DONSONQ9NYP3 566 aa16.64■□□□□ 0.25
PFN1-203ENST00000574872 RCOR3Q9P2K3 495 aaPredicted RBP16.64■□□□□ 0.25
PFN1-203ENST00000574872 PACSIN2Q9UNF0 486 aaPredicted RBP16.64■□□□□ 0.25
PFN1-203ENST00000574872 ACTL7AQ9Y615 435 aa16.64■□□□□ 0.25
PFN1-203ENST00000574872 WDFY4Q6ZS81 3184 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 C3orf70A6NLC5 250 aaPredicted RBP16.63■□□□□ 0.25
PFN1-203ENST00000574872 K7ERQ8 282 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 SYNCRIPO60506 623 aaKnown RBP16.63■□□□□ 0.25
PFN1-203ENST00000574872 ZMPSTE24O75844 475 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 SRPRAP08240 638 aaKnown RBP16.63■□□□□ 0.25
PFN1-203ENST00000574872 DNA2P51530 1060 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 NDST2P52849 883 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 ARF5P84085 180 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 DMWDQ09019 674 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 ENPP2Q13822 863 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 STARD3Q14849 445 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 E2F5Q15329 346 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 PARP15Q460N3 678 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 ACCSLQ4AC99 568 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 MAMSTRQ6ZN01 415 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 CACUL1Q86Y37 369 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 ARHGAP12Q8IWW6 846 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 SYCE1Q8N0S2 351 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 RNF10Q8N5U6 811 aaKnown RBP16.63■□□□□ 0.25
PFN1-203ENST00000574872 ATP11CQ8NB49 1132 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 PRSS33Q8NF86 280 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 HMGB4Q8WW32 186 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 ACE2Q9BYF1 805 aaPredicted RBP16.63■□□□□ 0.25
PFN1-203ENST00000574872 TMEM245Q9H330 911 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 LRRC19Q9H756 370 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 AMFRQ9UKV5 643 aa16.63■□□□□ 0.25
PFN1-203ENST00000574872 MFSD11O43934 449 aa16.62■□□□□ 0.25
PFN1-203ENST00000574872 PAPSS2O95340 614 aaPredicted RBP16.62■□□□□ 0.25
PFN1-203ENST00000574872 MAP3K6O95382 1288 aa16.62■□□□□ 0.25
PFN1-203ENST00000574872 APBB3O95704 486 aa16.62■□□□□ 0.25
PFN1-203ENST00000574872 VAV1P15498 845 aa16.62■□□□□ 0.25
PFN1-203ENST00000574872 CTNNA1P35221 906 aaKnown RBP16.62■□□□□ 0.25
PFN1-203ENST00000574872 NNMTP40261 264 aa16.62■□□□□ 0.25
PFN1-203ENST00000574872 PAPOLAP51003 745 aaKnown RBP16.62■□□□□ 0.25
PFN1-203ENST00000574872 DGKEP52429 567 aa16.62■□□□□ 0.25
PFN1-203ENST00000574872 NUBP1P53384 320 aa16.62■□□□□ 0.25
PFN1-203ENST00000574872 YBEYP58557 167 aaPredicted RBP16.62■□□□□ 0.25
PFN1-203ENST00000574872 NCBP2-AS2Q69YL0 99 aa16.62■□□□□ 0.25
PFN1-203ENST00000574872 MFSD7Q6UXD7 560 aa16.62■□□□□ 0.25
PFN1-203ENST00000574872 ARHGAP36Q6ZRI8 547 aa16.62■□□□□ 0.25
PFN1-203ENST00000574872 NT5DC3Q86UY8 548 aa16.62■□□□□ 0.25
PFN1-203ENST00000574872 CCDC50Q8IVM0 306 aa16.62■□□□□ 0.25
PFN1-203ENST00000574872 KATNAL2Q8IYT4 538 aa16.62■□□□□ 0.25
PFN1-203ENST00000574872 PQLC3Q8N755 202 aa16.62■□□□□ 0.25
PFN1-203ENST00000574872 FAF2Q96CS3 445 aa16.62■□□□□ 0.25
PFN1-203ENST00000574872 SLC6A17Q9H1V8 727 aa16.62■□□□□ 0.25
PFN1-203ENST00000574872 POLMQ9NP87 494 aaPredicted RBP16.62■□□□□ 0.25
PFN1-203ENST00000574872 BCCIPQ9P287 314 aaKnown RBP eCLIP16.62■□□□□ 0.25
PFN1-203ENST00000574872 HPCAL4Q9UM19 191 aa16.62■□□□□ 0.25
PFN1-203ENST00000574872 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.62■□□□□ 0.25
PFN1-203ENST00000574872 ARHGAP42A6NI28 874 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 H0Y858 1186 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 SMAD6O43541 496 aaKnown RBP16.61■□□□□ 0.25
PFN1-203ENST00000574872 KDELR3O43731 214 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 BNIP3LO60238 219 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 SIN3BO75182 1162 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 SP9P0CG40 484 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 SRCP12931 536 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 TDGF1P13385 188 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 CTNNA2P26232 953 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 FNTBP49356 437 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 DYNLT1P63172 113 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 SERINC3Q13530 473 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 HNRNPA1L2Q32P51 320 aaKnown RBP16.61■□□□□ 0.25
PFN1-203ENST00000574872 AFMIDQ63HM1 303 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 RETSATQ6NUM9 610 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 ZNF662Q6ZS27 426 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 RFX6Q8HWS3 928 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 PGBD3Q8N328 593 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 SH2D3CQ8N5H7 860 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.61■□□□□ 0.25
PFN1-203ENST00000574872 RNF157Q96PX1 679 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 MAK16Q9BXY0 300 aaKnown RBP16.61■□□□□ 0.25
PFN1-203ENST00000574872 CD248Q9HCU0 757 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 TRMT1Q9NXH9 659 aaKnown RBP16.61■□□□□ 0.25
PFN1-203ENST00000574872 FBXO4Q9UKT5 387 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 PYCARDQ9ULZ3 195 aa16.61■□□□□ 0.25
PFN1-203ENST00000574872 HS3ST2Q9Y278 367 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms