RNA–Protein interactions for RNA: ENST00000573745.1

CLDN7-206, Transcript of claudin 7, humanhuman

TSL 2

Gene CLDN7, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-206ENST00000573745 ZMPSTE24O75844 475 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 APBB3O95704 486 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 HLA-EP13747 358 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 PRKCHP24723 683 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 ACCSLQ4AC99 568 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 ANKRD20A8PQ5CZ79 823 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 TMCO3Q6UWJ1 677 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 VSIG1Q86XK7 387 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 ZNF354CQ86Y25 554 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 ATP11CQ8NB49 1132 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 UBE2Q2Q8WVN8 375 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 HHIPQ96QV1 700 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 ZNF670Q9BS34 389 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 MAK16Q9BXY0 300 aaKnown RBP16.31■□□□□ 0.2
CLDN7-206ENST00000573745 SLC39A8Q9C0K1 460 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 KLC2Q9H0B6 622 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 LRRC19Q9H756 370 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 EBF1Q9UH73 591 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 VPS51Q9UID3 782 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 AMFRQ9UKV5 643 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 HCN4Q9Y3Q4 1203 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 RAD54BQ9Y620 910 aa16.31■□□□□ 0.2
CLDN7-206ENST00000573745 CCDC163A0A0D9SF12 145 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 LRRD1A4D1F6 860 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 GRID2IPA4D2P6 1211 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 ARHGAP42A6NI28 874 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 TTC34A8MYJ7 566 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 ATP9BO43861 1147 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 PALMO75781 387 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 ZRANB2O95218 330 aaKnown RBP eCLIP16.3■□□□□ 0.2
CLDN7-206ENST00000573745 MT-CO1P00395 513 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 TDGF1P13385 188 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 GLDCP23378 1020 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 STK19P49842 368 aaPredicted RBP16.3■□□□□ 0.2
CLDN7-206ENST00000573745 CCDC173Q0VFZ6 552 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 SERINC3Q13530 473 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 CAMK2GQ13555 558 aaPredicted RBP16.3■□□□□ 0.2
CLDN7-206ENST00000573745 DLG2Q15700 870 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 HNRNPA1L2Q32P51 320 aaKnown RBP16.3■□□□□ 0.2
CLDN7-206ENST00000573745 AFMIDQ63HM1 303 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 KIAA1211LQ6NV74 962 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 RCOR2Q8IZ40 523 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 LRRC57Q8N9N7 239 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 PRSS33Q8NF86 280 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 PCDH19Q8TAB3 1148 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 RNF25Q96BH1 459 aaPredicted RBP16.3■□□□□ 0.2
CLDN7-206ENST00000573745 HMCESQ96FZ2 354 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 CELF6Q96J87 481 aaKnown RBP16.3■□□□□ 0.2
CLDN7-206ENST00000573745 RNF157Q96PX1 679 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 PRDM16Q9HAZ2 1276 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 CD248Q9HCU0 757 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 PRSS16Q9NQE7 514 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 KLHL11Q9NVR0 708 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 HS3ST2Q9Y278 367 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 PPP2R2CQ9Y2T4 447 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 PCDHA3Q9Y5H8 950 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 ZDBF2Q9HCK1 2354 aa16.3■□□□□ 0.2
CLDN7-206ENST00000573745 TCRBV21S2A2A0A5A6 115 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 ZSCAN5CA6NGD5 496 aaPredicted RBP16.29■□□□□ 0.2
CLDN7-206ENST00000573745 ZNF487B1APH4 448 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 KRT1P04264 644 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 COL9A1P20849 921 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 PXNP49023 591 aaPredicted RBP16.29■□□□□ 0.2
CLDN7-206ENST00000573745 PAPOLAP51003 745 aaKnown RBP16.29■□□□□ 0.2
CLDN7-206ENST00000573745 CLCN6P51797 869 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 PTPN5P54829 565 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 GEMIN4P57678 1058 aaKnown RBP16.29■□□□□ 0.2
CLDN7-206ENST00000573745 ARF5P84085 180 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 TCF15Q12870 199 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 HEATR6Q6AI08 1181 aaKnown RBP16.29■□□□□ 0.2
CLDN7-206ENST00000573745 ANO7Q6IWH7 933 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 LINGO4Q6UY18 593 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 PEX26Q7Z412 305 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 NT5DC3Q86UY8 548 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 RASSF3Q86WH2 238 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 PGBD3Q8N328 593 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 SH2D3CQ8N5H7 860 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 ZNF366Q8N895 744 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 NELL1Q92832 810 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 FAF2Q96CS3 445 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 ETNK2Q9NVF9 386 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 ZSCAN32Q9NX65 697 aa16.29■□□□□ 0.2
CLDN7-206ENST00000573745 EDDM13A0A1B0GTR0 161 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 CCDC66A2RUB6 948 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 C3orf70A6NLC5 250 aaPredicted RBP16.28■□□□□ 0.2
CLDN7-206ENST00000573745 K7ERQ8 282 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 DFFAO00273 331 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 AXIN1O15169 862 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 SRCP12931 536 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 SERPINB6P35237 376 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 FNTBP49356 437 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 PAFAH1B3Q15102 231 aaKnown RBP16.28■□□□□ 0.2
CLDN7-206ENST00000573745 C9orf64Q5T6V5 341 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 LONP2Q86WA8 852 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 TMPRSS6Q8IU80 811 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 LRRC49Q8IUZ0 686 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 ARHGAP12Q8IWW6 846 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 KATNAL2Q8IYT4 538 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 NPWQ8N729 165 aa16.28■□□□□ 0.2
CLDN7-206ENST00000573745 OR2T3Q8NH03 318 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms