RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ZBTB24O43167 697 aaPredicted RBP15.93■□□□□ 0.14
NUP88-207ENST00000573584 DNAJA2O60884 412 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 DAB1O75553 588 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 TFEBP19484 476 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 ARL13AQ5H913 290 aaPredicted RBP15.93■□□□□ 0.14
NUP88-207ENST00000573584 SLC16A10Q8TF71 515 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 NT5C3BQ969T7 300 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 PIGVQ9NUD9 493 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 MID2Q9UJV3 735 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 TLK1Q9UKI8 766 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 PCNTO95613 3336 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 ASB14A6NK59 587 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 FAM72CH0Y354 149 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 H3BRB1 525 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 PIGNO95427 931 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 TPH1P17752 444 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 ERCC2P18074 760 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 XRCC1P18887 633 aaPredicted RBP15.93■□□□□ 0.14
NUP88-207ENST00000573584 NDUFV1P49821 464 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 CSE1LP55060 971 aaKnown RBP15.93■□□□□ 0.14
NUP88-207ENST00000573584 FRG1Q14331 258 aaKnown RBP15.93■□□□□ 0.14
NUP88-207ENST00000573584 ZNF423Q2M1K9 1284 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 FAM72AQ5TYM5 149 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 LIPMQ5VYY2 423 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 FAM72DQ6L9T8 149 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 PDZD4Q76G19 769 aaPredicted RBP15.93■□□□□ 0.14
NUP88-207ENST00000573584 FAM72BQ86X60 149 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 ADAM32Q8TC27 787 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 RCN3Q96D15 328 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 NMD3Q96D46 503 aaKnown RBP15.93■□□□□ 0.14
NUP88-207ENST00000573584 C16orf70Q9BSU1 422 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 TUT1Q9H6E5 874 aaKnown RBP15.93■□□□□ 0.14
NUP88-207ENST00000573584 STAP1Q9ULZ2 295 aa15.93■□□□□ 0.14
NUP88-207ENST00000573584 APOA4P06727 396 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 AKAP5P24588 427 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 NAGLUP54802 743 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 PKNOX1P55347 436 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 PIGGQ5H8A4 983 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 NXNQ6DKJ4 435 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 ISLR2Q6UXK2 745 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 CATSPER4Q7RTX7 472 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 ZNF410Q86VK4 478 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 APPL2Q8NEU8 664 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 PPTC7Q8NI37 304 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 WNT8BQ93098 351 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 EPAS1Q99814 870 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 UBAP1Q9NZ09 502 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 COL1A2P08123 1366 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 MAGEB16A2A368 324 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 SMIM18P0DKX4 95 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 PPARGP37231 505 aaPredicted RBP15.92■□□□□ 0.14
NUP88-207ENST00000573584 GLRBP48167 497 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 PGGT1BP53609 377 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 GRM3Q14832 879 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 GRIK4Q16099 956 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 MARCH8Q5T0T0 291 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 TMEM198Q66K66 360 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 ZFP1Q6P2D0 407 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 ZYG11AQ6WRX3 759 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 RNF148Q8N7C7 305 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 SLC7A14Q8TBB6 771 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 USP13Q92995 863 aaPredicted RBP15.92■□□□□ 0.14
NUP88-207ENST00000573584 DGCR14Q96DF8 476 aaKnown RBP15.92■□□□□ 0.14
NUP88-207ENST00000573584 NXF3Q9H4D5 531 aaKnown RBP15.92■□□□□ 0.14
NUP88-207ENST00000573584 COPS7BQ9H9Q2 264 aaPredicted RBP15.92■□□□□ 0.14
NUP88-207ENST00000573584 BCAP29Q9UHQ4 241 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 ZDHHC2Q9UIJ5 367 aa15.92■□□□□ 0.14
NUP88-207ENST00000573584 UBQLN1Q9UMX0 589 aaKnown RBP15.92■□□□□ 0.14
NUP88-207ENST00000573584 PIRO00625 290 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 GRID2O43424 1007 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 RECQL4O94761 1208 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 CLPTM1O96005 669 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 ENO3P13929 434 aaPredicted RBP15.91■□□□□ 0.14
NUP88-207ENST00000573584 CYP2B6P20813 491 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 SH3BGRP55822 239 aaPredicted RBP15.91■□□□□ 0.14
NUP88-207ENST00000573584 PPP2R5DQ14738 602 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 ANO4Q32M45 955 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 KCTD11Q693B1 232 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 TMEM151AQ8N4L1 468 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 SCYL1Q96KG9 808 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 TSNARE1Q96NA8 513 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 CATSPER2Q96P56 530 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 MLPHQ9BV36 600 aaPredicted RBP15.91■□□□□ 0.14
NUP88-207ENST00000573584 DUSP16Q9BY84 665 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 EPB41L1Q9H4G0 881 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 LRRC4Q9HBW1 653 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 VPS28Q9UK41 221 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 CLDN5O00501 218 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 BEST1O76090 585 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 CRTAMO95727 393 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 CD68P34810 354 aaPredicted RBP15.91■□□□□ 0.14
NUP88-207ENST00000573584 ADRA1BP35368 520 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 RPL5P46777 297 aaKnown RBP15.91■□□□□ 0.14
NUP88-207ENST00000573584 NPY2RP49146 381 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 MS4A2Q01362 244 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 PRKAA1Q13131 559 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 ART3Q13508 389 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 CEACAM7Q14002 265 aa15.91■□□□□ 0.14
NUP88-207ENST00000573584 R3HDM1Q15032 1099 aaKnown RBP15.91■□□□□ 0.14
NUP88-207ENST00000573584 PDCD2Q16342 344 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms