RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 NUP85Q9BW27 656 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 DHX35Q9H5Z1 703 aaKnown RBP21.17■□□□□ 0.98
CHMP6-204ENST00000572778 NEU3Q9UQ49 428 aa21.17■□□□□ 0.98
CHMP6-204ENST00000572778 ATXN2Q99700 1313 aaKnown RBP21.16■□□□□ 0.98
CHMP6-204ENST00000572778 SSU72P8A0A1W2PR75 194 aa21.16■□□□□ 0.98
CHMP6-204ENST00000572778 AKR1B10O60218 316 aa21.16■□□□□ 0.98
CHMP6-204ENST00000572778 BNIP3LO60238 219 aa21.16■□□□□ 0.98
CHMP6-204ENST00000572778 IGLV3-19P01714 112 aa21.16■□□□□ 0.98
CHMP6-204ENST00000572778 CYP1A2P05177 515 aa21.16■□□□□ 0.98
CHMP6-204ENST00000572778 ITPKAP23677 461 aa21.16■□□□□ 0.98
CHMP6-204ENST00000572778 MAPK8IP2Q13387 824 aaPredicted RBP21.16■□□□□ 0.98
CHMP6-204ENST00000572778 CST6Q15828 149 aa21.16■□□□□ 0.98
CHMP6-204ENST00000572778 SLC18A3Q16572 532 aa21.16■□□□□ 0.98
CHMP6-204ENST00000572778 AASDHQ4L235 1098 aaPredicted RBP21.16■□□□□ 0.98
CHMP6-204ENST00000572778 ERMARDQ5T6L9 678 aa21.16■□□□□ 0.98
CHMP6-204ENST00000572778 Q6ZVU0 165 aa21.16■□□□□ 0.98
CHMP6-204ENST00000572778 GAS2L3Q86XJ1 694 aa21.16■□□□□ 0.98
CHMP6-204ENST00000572778 PEBP4Q96S96 227 aa21.16■□□□□ 0.98
CHMP6-204ENST00000572778 CHP1Q99653 195 aa21.16■□□□□ 0.98
CHMP6-204ENST00000572778 NCAPGQ9BPX3 1015 aa21.16■□□□□ 0.98
CHMP6-204ENST00000572778 SNRNP25Q9BV90 132 aaKnown RBP21.16■□□□□ 0.98
CHMP6-204ENST00000572778 NENFQ9UMX5 172 aa21.16■□□□□ 0.98
CHMP6-204ENST00000572778 HS3ST2Q9Y278 367 aa21.16■□□□□ 0.98
CHMP6-204ENST00000572778 NCKAP1Q9Y2A7 1128 aa21.16■□□□□ 0.98
CHMP6-204ENST00000572778 K7ERQ8 282 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 MID1O15344 667 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 FOXD2O60548 495 aaPredicted RBP21.15■□□□□ 0.98
CHMP6-204ENST00000572778 RAMP2O60895 175 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 LRCH4O75427 683 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 IL1BP01584 269 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 C7P10643 843 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 ACVRL1P37023 503 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 ETFBP38117 255 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 PSMD8P48556 350 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 TPI1P60174 286 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 SFSWAPQ12872 951 aaKnown RBP21.15■□□□□ 0.98
CHMP6-204ENST00000572778 TBX2Q13207 712 aaPredicted RBP21.15■□□□□ 0.98
CHMP6-204ENST00000572778 SEMA3BQ13214 749 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 ELAVL3Q14576 367 aaKnown RBP21.15■□□□□ 0.98
CHMP6-204ENST00000572778 POLD3Q15054 466 aaPredicted RBP21.15■□□□□ 0.98
CHMP6-204ENST00000572778 CA9Q16790 459 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 DAB2IPQ5VWQ8 1189 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 TCEAL6Q6IPX3 200 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 RETSATQ6NUM9 610 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 ZNF354CQ86Y25 554 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 SYT12Q8IV01 421 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 RGL4Q8IZJ4 473 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 OR8D1Q8WZ84 308 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 FOXJ1Q92949 421 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 TCEAL3Q969E4 200 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 ZNF419Q96HQ0 510 aaPredicted RBP21.15■□□□□ 0.98
CHMP6-204ENST00000572778 BTBD6Q96KE9 485 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 CCDC42Q96M95 316 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 BTBD1Q9H0C5 482 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 MAGEH1Q9H213 219 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 PABPC3Q9H361 631 aaKnown RBP21.15■□□□□ 0.98
CHMP6-204ENST00000572778 CATSPERBQ9H7T0 1116 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 TMEM74BQ9NUR3 256 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 FBXL12Q9NXK8 326 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 ANAPC7Q9UJX3 599 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 SCML1Q9UN30 329 aa21.15■□□□□ 0.98
CHMP6-204ENST00000572778 PRR5-ARHGAP8B1AHC4 643 aa21.14■□□□□ 0.97
CHMP6-204ENST00000572778 EEF2KO00418 725 aaKnown RBP21.14■□□□□ 0.97
CHMP6-204ENST00000572778 SMAD6O43541 496 aaKnown RBP21.14■□□□□ 0.97
CHMP6-204ENST00000572778 SLC8A1P32418 973 aa21.14■□□□□ 0.97
CHMP6-204ENST00000572778 ARHGAP8P85298 464 aa21.14■□□□□ 0.97
CHMP6-204ENST00000572778 PIGHQ14442 188 aaPredicted RBP21.14■□□□□ 0.97
CHMP6-204ENST00000572778 ACAP1Q15027 740 aa21.14■□□□□ 0.97
CHMP6-204ENST00000572778 ASTE1Q2TB18 679 aaPredicted RBP21.14■□□□□ 0.97
CHMP6-204ENST00000572778 SYCP2LQ5T4T6 812 aa21.14■□□□□ 0.97
CHMP6-204ENST00000572778 RTL3Q8N8U3 475 aaKnown RBP21.14■□□□□ 0.97
CHMP6-204ENST00000572778 CTNNBL1Q8WYA6 563 aaPredicted RBP21.14■□□□□ 0.97
CHMP6-204ENST00000572778 ARHGEF2Q92974 986 aaKnown RBP21.14■□□□□ 0.97
CHMP6-204ENST00000572778 OMDQ99983 421 aa21.14■□□□□ 0.97
CHMP6-204ENST00000572778 PACSIN1Q9BY11 444 aa21.14■□□□□ 0.97
CHMP6-204ENST00000572778 ACE2Q9BYF1 805 aaPredicted RBP21.14■□□□□ 0.97
CHMP6-204ENST00000572778 NHEJ1Q9H9Q4 299 aaPredicted RBP21.14■□□□□ 0.97
CHMP6-204ENST00000572778 CTTNBP2NLQ9P2B4 639 aa21.14■□□□□ 0.97
CHMP6-204ENST00000572778 IP6K2Q9UHH9 426 aa21.14■□□□□ 0.97
CHMP6-204ENST00000572778 HPCAL4Q9UM19 191 aa21.14■□□□□ 0.97
CHMP6-204ENST00000572778 GVINP1Q7Z2Y8 2422 aa21.14■□□□□ 0.97
CHMP6-204ENST00000572778 CKAP5Q14008 2032 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.13■□□□□ 0.97
CHMP6-204ENST00000572778 A0A1W2PP55 124 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 MEI4A8MW99 385 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 PATE3B3GLJ2 98 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 MYO1FO00160 1098 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 KHNYNO15037 678 aaKnown RBP21.13■□□□□ 0.97
CHMP6-204ENST00000572778 DAPK3O43293 454 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 RNASEH2AO75792 299 aaKnown RBP21.13■□□□□ 0.97
CHMP6-204ENST00000572778 ZMPSTE24O75844 475 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 H2AFZP0C0S5 128 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 ACSL1P33121 698 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 PCK1P35558 622 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 DPP6P42658 865 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 CLCN6P51797 869 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 ZNF75DP51815 510 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 SLC20A2Q08357 652 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 H2AFVQ71UI9 128 aa21.13■□□□□ 0.97
CHMP6-204ENST00000572778 DSG4Q86SJ6 1040 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms