RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 HMGB4Q8WW32 186 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 CALML4Q96GE6 196 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 ZDHHC12Q96GR4 267 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 INTS4Q96HW7 963 aaKnown RBP3.43□□□□□ -1.86
CNOT1-221ENST00000569924 ZNF668Q96K58 619 aaPredicted RBP3.43□□□□□ -1.86
CNOT1-221ENST00000569924 SPATA17Q96L03 361 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 PWWP2AQ96N64 755 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 KLHL32Q96NJ5 620 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 SLC46A1Q96NT5 459 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 GPR20Q99678 358 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 VKORC1Q9BQB6 163 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 GORASP1Q9BQQ3 440 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 C11orf84Q9BUA3 381 aaPredicted RBP3.43□□□□□ -1.86
CNOT1-221ENST00000569924 TEX13BQ9BXU2 312 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 SEZ6LQ9BYH1 1024 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 IMPG2Q9BZV3 1241 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 TRIM5Q9C035 493 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 UPF3AQ9H1J1 476 aaKnown RBP3.43□□□□□ -1.86
CNOT1-221ENST00000569924 OR10A4Q9H209 315 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 SLC6A15Q9H2J7 730 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 MUC13Q9H3R2 512 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 ZWILCHQ9H900 591 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 BRF2Q9HAW0 419 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 IL21RQ9HBE5 538 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 TPSG1Q9NRR2 321 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 LIN7CQ9NUP9 197 aaKnown RBP3.43□□□□□ -1.86
CNOT1-221ENST00000569924 PPP1R14DQ9NXH3 145 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 DNAJB11Q9UBS4 358 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 BAG5Q9UL15 447 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 TBX21Q9UL17 535 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 FAM184BQ9ULE4 1060 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 SHOC2Q9UQ13 582 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 CLCA2Q9UQC9 943 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 EXOC6BQ9Y2D4 811 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 SNX5Q9Y5X3 404 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 MYO9BQ13459 2157 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 ELP1O95163 1332 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 MROH7Q68CQ1 1323 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 ZBED9Q6R2W3 1325 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 SYNRGQ9UMZ2 1314 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 GREB1LQ9C091 1923 aaPredicted RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 BAZ2AQ9UIF9 1905 aaKnown RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 PRUNE2Q8WUY3 3088 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 MUC3AQ02505 3323 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 KIF28PB7ZC32 967 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 CLGNO14967 610 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 ATP2A1O14983 1001 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 RGS10O43665 173 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 PRKAB2O43741 272 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 HMMRO75330 724 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 GJB3O75712 270 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 CABYRO75952 493 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 MED26O95402 600 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 CER1O95813 267 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 BAG2O95816 211 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 SNAI1O95863 264 aaPredicted RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 HNRNPCP07910 306 aaKnown RBP eCLIP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 ATXN1LP0C7T5 689 aaKnown RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 EEF2P13639 858 aaKnown RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 MUTP22033 750 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 LRPAP1P30533 357 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 GGT5P36269 586 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 NNMTP40261 264 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 MC3RP41968 323 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 ADCY7P51828 1080 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 DGKEP52429 567 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 CLRN1P58418 232 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 BPIFB4P59827 614 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 KRT17Q04695 432 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 TBL3Q12788 808 aaKnown RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 STK4Q13043 487 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 PDCLQ13371 301 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 MRPL49Q13405 166 aaKnown RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 DCTN2Q13561 401 aaKnown RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 SCARB2Q14108 478 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 TBCCQ15814 346 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 KCNA10Q16322 511 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 CBWD5Q5RIA9 395 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 NUGGCQ68CJ6 796 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 GPR139Q6DWJ6 353 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 ZSCAN25Q6NSZ9 544 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 PSRC1Q6PGN9 363 aaPredicted RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 SLC22A25Q6T423 547 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 MED25Q71SY5 747 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 SZRD1Q7Z422 152 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 GALNTL5Q7Z4T8 443 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 B3GNT8Q7Z7M8 397 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 CCDC105Q8IYK2 499 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 ULK2Q8IYT8 1036 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 TAGAPQ8N103 731 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 TMEM199Q8N511 208 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 SRBD1Q8N5C6 995 aaKnown RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 FITM2Q8N6M3 262 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 FAM71DQ8N9W8 422 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 FSIP1Q8NA03 581 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 KYQ8NBH2 561 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 PDPRQ8NCN5 879 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 MBD3L2Q8NHZ7 208 aaPredicted RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 ABHD4Q8TB40 342 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 METTL6Q8TCB7 284 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms