RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 LAIR1Q6GTX8 287 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 MSANTD2Q6P1R3 559 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 RFWD3Q6PCD5 774 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 LRRC31Q6UY01 552 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 TRIM72Q6ZMU5 477 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 RBM43Q6ZSC3 357 aaKnown RBP4.99□□□□□ -1.61
CNOT1-219ENST00000569882 FAM183BPQ6ZVS7 135 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 ASCL5Q7RTU5 278 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 TAC4Q86UU9 113 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 WDR5BQ86VZ2 330 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 C12orf40Q86WS4 652 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 ZNF677Q86XU0 584 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 ZNF354CQ86Y25 554 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 CACUL1Q86Y37 369 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 IRF2BP1Q8IU81 584 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 FAM71AQ8IYT1 594 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 LGI2Q8N0V4 545 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 DEFB106AQ8N104 65 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 AHI1Q8N157 1196 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 SCML4Q8N228 414 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 CPXM2Q8N436 756 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 ZNF276Q8N554 614 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 PAF1Q8N7H5 531 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 UBR7Q8N806 425 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 DQX1Q8TE96 717 aaKnown RBP4.99□□□□□ -1.61
CNOT1-219ENST00000569882 WFIKKN2Q8TEU8 576 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 USP33Q8TEY7 942 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 GAB3Q8WWW8 586 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 CPA5Q8WXQ8 436 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 SGSM3Q96HU1 749 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 BTN2A3PQ96KV6 586 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 RPRD1AQ96P16 312 aaPredicted RBP4.99□□□□□ -1.61
CNOT1-219ENST00000569882 CPXM1Q96SM3 734 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 SELENOOQ9BVL4 669 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 SLC2A11Q9BYW1 496 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 SIK2Q9H0K1 926 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 LHX5Q9H2C1 402 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 WDCPQ9H6R7 721 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 C7orf69Q9H7B7 122 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 FBRSL1Q9HCM7 1045 aaKnown RBP4.99□□□□□ -1.61
CNOT1-219ENST00000569882 OSGEPQ9NPF4 335 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 ABCB8Q9NUT2 735 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.99□□□□□ -1.61
CNOT1-219ENST00000569882 RRN3Q9NYV6 651 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.99□□□□□ -1.61
CNOT1-219ENST00000569882 LIMA1Q9UHB6 759 aaKnown RBP4.99□□□□□ -1.61
CNOT1-219ENST00000569882 CNTN6Q9UQ52 1028 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 INVSQ9Y283 1065 aa4.99□□□□□ -1.61
CNOT1-219ENST00000569882 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.98□□□□□ -1.61
CNOT1-219ENST00000569882 CCDC163A0A0D9SF12 145 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 MEI4A8MW99 385 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 TMCO5BA8MYB1 307 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 PROB1E7EW31 1015 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 K7EQS6 105 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 CLGNO14967 610 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 NPC1O15118 1278 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 PAPSS1O43252 624 aaPredicted RBP4.98□□□□□ -1.61
CNOT1-219ENST00000569882 AP5Z1O43299 807 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 CBFA2T2O43439 604 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 TIMM44O43615 452 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 FOXD2O60548 495 aaPredicted RBP4.98□□□□□ -1.61
CNOT1-219ENST00000569882 ZNF217O75362 1048 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 DAB1O75553 588 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 PAPSS2O95340 614 aaPredicted RBP4.98□□□□□ -1.61
CNOT1-219ENST00000569882 F9P00740 461 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 TGFB1P01137 390 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 IGLV1-40P01703 118 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 KLKB1P03952 638 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 ERBB2P04626 1255 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 CFIP05156 583 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 CALB1P05937 261 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 RETP07949 1114 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 MMEP08473 750 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 PABPC1P11940 636 aaKnown RBP4.98□□□□□ -1.61
CNOT1-219ENST00000569882 EDN3P14138 238 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 FERP16591 822 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 SDHBP21912 280 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 SDC4P31431 198 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 MATKP42679 507 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 KLK7P49862 253 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 OXCT1P55809 520 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 UBASH3AP57075 661 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 CDR2Q01850 454 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 SLC6A3Q01959 620 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 RPL6Q02878 288 aaKnown RBP4.98□□□□□ -1.61
CNOT1-219ENST00000569882 LMNB2Q03252 620 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 DMWDQ09019 674 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 C19orf57Q0VDD7 668 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 ZNF177Q13360 481 aaPredicted RBP4.98□□□□□ -1.61
CNOT1-219ENST00000569882 NFKBIBQ15653 356 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 CDO1Q16878 200 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 TTC31Q49AM3 519 aaPredicted RBP4.98□□□□□ -1.61
CNOT1-219ENST00000569882 ACCSLQ4AC99 568 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 SYCP2LQ5T4T6 812 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 EMC10Q5UCC4 262 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 SFMBT2Q5VUG0 894 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 EGFLAMQ63HQ2 1017 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 IL31Q6EBC2 164 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 PPP1R2P3Q6NXS1 205 aa4.98□□□□□ -1.61
CNOT1-219ENST00000569882 DNAJC24Q6P3W2 148 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms