RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 CPNE5Q9HCH3 593 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 DDIT4Q9NX09 232 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 SLC25A13Q9UJS0 675 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 MAN1B1Q9UKM7 699 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 UNC13CQ8NB66 2214 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 A0A1B0GVM2 712 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 A0A1W2PQU0 124 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 TCAF2A6NFQ2 919 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 KPNA3O00505 521 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-220ENST00000569827 CASC3O15234 703 aaKnown RBP12.4□□□□□ -0.42
CAPN3-220ENST00000569827 NEBLO76041 1014 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 CNTN5O94779 1100 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 MT-CO3P00414 261 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 THEGLP0DJG4 465 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 PLA2G2AP14555 144 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 ACP1P24666 158 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 YWHAZP63104 245 aaKnown RBP12.4□□□□□ -0.42
CAPN3-220ENST00000569827 NME3Q13232 169 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 PDCLQ13371 301 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 AUHQ13825 339 aaKnown RBP12.4□□□□□ -0.42
CAPN3-220ENST00000569827 TBC1D25Q3MII6 688 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 SETMARQ53H47 684 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-220ENST00000569827 COBLL1Q53SF7 1204 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 PIP5KL1Q5T9C9 394 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 TRIM69Q86WT6 500 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 OXR1Q8N573 874 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 CHST14Q8NCH0 376 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 EHBP1Q8NDI1 1231 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 OR13H1Q8NG92 308 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 GRIN3AQ8TCU5 1115 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 NELFBQ8WX92 580 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 FGF11Q92914 225 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 FAM131CQ96AQ9 280 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 ARRDC3Q96B67 414 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 KLHDC7BQ96G42 594 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 GSDMAQ96QA5 445 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 CPXM1Q96SM3 734 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 LGMNQ99538 433 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 OSBPL2Q9H1P3 480 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 UBE2TQ9NPD8 197 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-220ENST00000569827 TMPRSS4Q9NRS4 437 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 VPS28Q9UK41 221 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 PPM1HQ9ULR3 514 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 LRP4O75096 1905 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 BOD1L1Q8NFC6 3051 aa12.4□□□□□ -0.42
CAPN3-220ENST00000569827 SCN8AQ9UQD0 1980 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 BIN1O00499 593 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 PSMA7O14818 248 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 SART1O43290 800 aaKnown RBP12.39□□□□□ -0.43
CAPN3-220ENST00000569827 SMAD6O43541 496 aaKnown RBP12.39□□□□□ -0.43
CAPN3-220ENST00000569827 ATP9BO43861 1147 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 ENDOD1O94919 500 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 SMC2O95347 1197 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 SRCP12931 536 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 TFE3P19532 575 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-220ENST00000569827 BMP6P22004 513 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 DGKAP23743 735 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 RRM1P23921 792 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 GNA15P30679 374 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 USP8P40818 1118 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 ACADSBP45954 432 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 GCNT1Q02742 428 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 KCNH2Q12809 1159 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 EIF4EBP2Q13542 120 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-220ENST00000569827 ARHGAP44Q17R89 818 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 RABGAP1LQ5R372 815 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 SEL1L3Q68CR1 1132 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 TTI2Q6NXR4 508 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 LINGO4Q6UY18 593 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 FAM183BPQ6ZVS7 135 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 GPR155Q7Z3F1 870 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 SLC22A18ASQ8N1D0 253 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 SH2D3CQ8N5H7 860 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 DCBLD1Q8N8Z6 715 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 TMEM145Q8NBT3 493 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 ZNF606Q8WXB4 792 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 CEP63Q96MT8 703 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 PSMB7Q99436 277 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 FEM1AQ9BSK4 669 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 CRACR2AQ9BSW2 395 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 SIK2Q9H0K1 926 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 MUC3BQ9H195 1237 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 TNKS2Q9H2K2 1166 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 ANLNQ9NQW6 1124 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.39□□□□□ -0.43
CAPN3-220ENST00000569827 HS3ST4Q9Y661 456 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 NAV2Q8IVL1 2488 aa12.39□□□□□ -0.43
CAPN3-220ENST00000569827 AHCTF1Q8WYP5 2266 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 PMS2P1A4D2B8 440 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 BECN2A8MW95 431 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 C1QTNF3-AMACRE9PGA6 284 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 PRAMEF26H0Y7S4 382 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 I6L893 689 aaPredicted RBP12.38□□□□□ -0.43
CAPN3-220ENST00000569827 PAGE1O75459 146 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 PNMA6AP0CW24 399 aaPredicted RBP12.38□□□□□ -0.43
CAPN3-220ENST00000569827 GIMD1P0DJR0 217 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 ACTN2P35609 894 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 PLK1P53350 603 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 GABREP78334 506 aa12.38□□□□□ -0.43
CAPN3-220ENST00000569827 SULT2A1Q06520 285 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms