RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 IQCHQ86VS3 1027 aa14.03□□□□□ -0.16
CNOT1-215ENST00000569020 TRIM69Q86WT6 500 aa14.03□□□□□ -0.16
CNOT1-215ENST00000569020 SH2D3CQ8N5H7 860 aa14.03□□□□□ -0.16
CNOT1-215ENST00000569020 ZNF397Q8NF99 534 aaPredicted RBP14.03□□□□□ -0.16
CNOT1-215ENST00000569020 OR52K2Q8NGK3 314 aa14.03□□□□□ -0.16
CNOT1-215ENST00000569020 PIP4K2CQ8TBX8 421 aa14.03□□□□□ -0.16
CNOT1-215ENST00000569020 HNRNPLLQ8WVV9 542 aaKnown RBP14.03□□□□□ -0.16
CNOT1-215ENST00000569020 CCDC114Q96M63 670 aa14.03□□□□□ -0.16
CNOT1-215ENST00000569020 SIK2Q9H0K1 926 aa14.03□□□□□ -0.16
CNOT1-215ENST00000569020 PDCL3Q9H2J4 239 aa14.03□□□□□ -0.16
CNOT1-215ENST00000569020 WDCPQ9H6R7 721 aa14.03□□□□□ -0.16
CNOT1-215ENST00000569020 ARHGAP20Q9P2F6 1191 aa14.03□□□□□ -0.16
CNOT1-215ENST00000569020 SARDHQ9UL12 918 aa14.03□□□□□ -0.16
CNOT1-215ENST00000569020 PPM1HQ9ULR3 514 aa14.03□□□□□ -0.16
CNOT1-215ENST00000569020 STAP1Q9ULZ2 295 aa14.03□□□□□ -0.16
CNOT1-215ENST00000569020 TBC1D30Q9Y2I9 924 aa14.03□□□□□ -0.16
CNOT1-215ENST00000569020 DOCK4Q8N1I0 1966 aa14.03□□□□□ -0.16
CNOT1-215ENST00000569020 CBX4O00257 560 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 JUPP14923 745 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 CLCN1P35523 988 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 GGCXP38435 758 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 RXRGP48443 463 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 IRAK1P51617 712 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 BPIFB4P59827 614 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 UBE2HP62256 183 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 CCDC15Q0P6D6 951 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 CNTN1Q12860 1018 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 OVGP1Q12889 678 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 BNIP3Q12983 259 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 DNAJC3Q13217 504 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 MAN2A1Q16706 1144 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 POM121L1PQ3SYA9 428 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 PTPN20Q4JDL3 420 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 SETMARQ53H47 684 aaPredicted RBP14.02□□□□□ -0.17
CNOT1-215ENST00000569020 BRMS1LQ5PSV4 323 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 AGBL4Q5VU57 503 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 PDZD3Q86UT5 571 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 SLC47A2Q86VL8 602 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 FAM114A1Q8IWE2 563 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 TKTL2Q9H0I9 626 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 SCUBE2Q9NQ36 999 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 PLCB1Q9NQ66 1216 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 ARHGEF38Q9NXL2 777 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.02□□□□□ -0.17
CNOT1-215ENST00000569020 PAXBP1Q9Y5B6 917 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 OR51B4Q9Y5P0 310 aa14.02□□□□□ -0.17
CNOT1-215ENST00000569020 GOLGA4Q13439 2230 aaKnown RBP14.02□□□□□ -0.17
CNOT1-215ENST00000569020 PRAMEF26H0Y7S4 382 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 FOXN3O00409 490 aaPredicted RBP14.01□□□□□ -0.17
CNOT1-215ENST00000569020 F9P00740 461 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 RHOCP08134 193 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 SRCP12931 536 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 SULT1E1P49888 294 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 RNASE9P60153 205 aaKnown RBP14.01□□□□□ -0.17
CNOT1-215ENST00000569020 DEUP1Q05D60 604 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 C6orf118Q5T5N4 469 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 LRRC31Q6UY01 552 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 C14orf80Q86SX3 495 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 SPATS2Q86XZ4 545 aaKnown RBP14.01□□□□□ -0.17
CNOT1-215ENST00000569020 IRF2BP1Q8IU81 584 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 MLKLQ8NB16 471 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 ATP11CQ8NB49 1132 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 TMEM35BQ8NCS4 154 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 NPY6RQ99463 290 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 C2orf49Q9BVC5 232 aaPredicted RBP14.01□□□□□ -0.17
CNOT1-215ENST00000569020 PREBQ9HCU5 417 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 SIX2Q9NPC8 291 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 PIGVQ9NUD9 493 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 TMEM51Q9NW97 253 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 AJAP1Q9UKB5 411 aaPredicted RBP14.01□□□□□ -0.17
CNOT1-215ENST00000569020 HS3ST2Q9Y278 367 aa14.01□□□□□ -0.17
CNOT1-215ENST00000569020 PKD1L2Q7Z442 2459 aa14□□□□□ -0.17
CNOT1-215ENST00000569020 ZZEF1O43149 2961 aa14□□□□□ -0.17
CNOT1-215ENST00000569020 RNGTTO60942 597 aaKnown RBP14□□□□□ -0.17
CNOT1-215ENST00000569020 CNTN5O94779 1100 aa14□□□□□ -0.17
CNOT1-215ENST00000569020 ADCY5O95622 1261 aa14□□□□□ -0.17
CNOT1-215ENST00000569020 PRKCSHP14314 528 aaPredicted RBP14□□□□□ -0.17
CNOT1-215ENST00000569020 CHRNA3P32297 505 aa14□□□□□ -0.17
CNOT1-215ENST00000569020 CXCR3P49682 368 aa14□□□□□ -0.17
CNOT1-215ENST00000569020 ACADVLP49748 655 aa14□□□□□ -0.17
CNOT1-215ENST00000569020 ALFQ53S48 1182 aa14□□□□□ -0.17
CNOT1-215ENST00000569020 ACBD5Q5T8D3 534 aaPredicted RBP14□□□□□ -0.17
CNOT1-215ENST00000569020 SFMBT2Q5VUG0 894 aa14□□□□□ -0.17
CNOT1-215ENST00000569020 OTUD1Q5VV17 481 aaPredicted RBP14□□□□□ -0.17
CNOT1-215ENST00000569020 NEK5Q6P3R8 708 aa14□□□□□ -0.17
CNOT1-215ENST00000569020 SETD3Q86TU7 594 aaPredicted RBP14□□□□□ -0.17
CNOT1-215ENST00000569020 FAM71AQ8IYT1 594 aa14□□□□□ -0.17
CNOT1-215ENST00000569020 NXPE2Q96DL1 559 aa14□□□□□ -0.17
CNOT1-215ENST00000569020 PGAP3Q96FM1 320 aaPredicted RBP14□□□□□ -0.17
CNOT1-215ENST00000569020 KLHDC7BQ96G42 594 aa14□□□□□ -0.17
CNOT1-215ENST00000569020 NDST4Q9H3R1 872 aa14□□□□□ -0.17
CNOT1-215ENST00000569020 DYRK4Q9NR20 520 aa14□□□□□ -0.17
CNOT1-215ENST00000569020 DMXL2Q8TDJ6 3036 aa14□□□□□ -0.17
CNOT1-215ENST00000569020 TDRD6O60522 2096 aaKnown RBP14□□□□□ -0.17
CNOT1-215ENST00000569020 CACNA1GO43497 2377 aa13.99□□□□□ -0.17
CNOT1-215ENST00000569020 KPNA3O00505 521 aaPredicted RBP13.99□□□□□ -0.17
CNOT1-215ENST00000569020 PRNPP04156 253 aa13.99□□□□□ -0.17
CNOT1-215ENST00000569020 PNMA6AP0CW24 399 aaPredicted RBP13.99□□□□□ -0.17
CNOT1-215ENST00000569020 CKMT2P17540 419 aa13.99□□□□□ -0.17
CNOT1-215ENST00000569020 TFE3P19532 575 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms