RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 CTSOP43234 321 aaPredicted RBP16.06■□□□□ 0.16
SPG7-218ENST00000568205 NR2C2P49116 596 aa16.06■□□□□ 0.16
SPG7-218ENST00000568205 LRRC32Q14392 662 aa16.06■□□□□ 0.16
SPG7-218ENST00000568205 ARHGAP36Q6ZRI8 547 aa16.06■□□□□ 0.16
SPG7-218ENST00000568205 LRRC49Q8IUZ0 686 aa16.06■□□□□ 0.16
SPG7-218ENST00000568205 CCDC33Q8N5R6 958 aa16.06■□□□□ 0.16
SPG7-218ENST00000568205 COG1Q8WTW3 980 aa16.06■□□□□ 0.16
SPG7-218ENST00000568205 CYB5D2Q8WUJ1 264 aa16.06■□□□□ 0.16
SPG7-218ENST00000568205 P3H4Q92791 437 aa16.06■□□□□ 0.16
SPG7-218ENST00000568205 HAUS1Q96CS2 278 aa16.06■□□□□ 0.16
SPG7-218ENST00000568205 OLFM3Q96PB7 478 aa16.06■□□□□ 0.16
SPG7-218ENST00000568205 OSBPL6Q9BZF3 934 aa16.06■□□□□ 0.16
SPG7-218ENST00000568205 MFSD1Q9H3U5 465 aa16.06■□□□□ 0.16
SPG7-218ENST00000568205 RBM12Q9NTZ6 932 aaKnown RBP16.06■□□□□ 0.16
SPG7-218ENST00000568205 SAE1Q9UBE0 346 aaPredicted RBP16.06■□□□□ 0.16
SPG7-218ENST00000568205 IPO11Q9UI26 975 aaKnown RBP16.06■□□□□ 0.16
SPG7-218ENST00000568205 HCN2Q9UL51 889 aa16.06■□□□□ 0.16
SPG7-218ENST00000568205 HPCAL4Q9UM19 191 aa16.06■□□□□ 0.16
SPG7-218ENST00000568205 MTF2Q9Y483 593 aaPredicted RBP16.06■□□□□ 0.16
SPG7-218ENST00000568205 TCRBV7S2A1N4TA0A589 114 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 ANTXRLA6NF34 631 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 TMEM221A6NGB7 291 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 ZSCAN5CA6NGD5 496 aaPredicted RBP16.05■□□□□ 0.16
SPG7-218ENST00000568205 M0R296 226 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 KIF2AO00139 706 aaPredicted RBP16.05■□□□□ 0.16
SPG7-218ENST00000568205 STK25O00506 426 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 CES2O00748 559 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 NCAM2O15394 837 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 PRAMEF11O60813 436 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 FGGP02679 453 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 TUBB4AP04350 444 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 CHRM1P11229 460 aaPredicted RBP16.05■□□□□ 0.16
SPG7-218ENST00000568205 CHRNB1P11230 501 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 PRLRP16471 622 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 GARSP41250 739 aaKnown RBP16.05■□□□□ 0.16
SPG7-218ENST00000568205 KIR2DL1P43626 348 aaPredicted RBP16.05■□□□□ 0.16
SPG7-218ENST00000568205 SEC13P55735 322 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 ARF5P84085 180 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 ECT2LQ008S8 904 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 PDK1Q15118 436 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 PTPRNQ16849 979 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 EMC10Q5UCC4 262 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 EGFLAMQ63HQ2 1017 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 RETSATQ6NUM9 610 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 BZW1Q7L1Q6 419 aaKnown RBP16.05■□□□□ 0.16
SPG7-218ENST00000568205 SYNPOQ8N3V7 929 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 RASGEF1CQ8N431 466 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 CCDC26Q8TAB7 109 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 ACTL9Q8TC94 416 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 KCNV2Q8TDN2 545 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 MRGPRX3Q96LB0 322 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 LMAN1LQ9HAT1 526 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 SP110Q9HB58 689 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 THAP10Q9P2Z0 257 aaPredicted RBP16.05■□□□□ 0.16
SPG7-218ENST00000568205 SLC25A13Q9UJS0 675 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 ERVW-1Q9UQF0 538 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 SAR1BQ9Y6B6 198 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 DOCK4Q8N1I0 1966 aa16.05■□□□□ 0.16
SPG7-218ENST00000568205 KIAA1549LQ6ZVL6 1849 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 CXorf51AA0A1B0GTR3 108 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 J3KR12 359 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 RNF40O75150 1001 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 PDGFBP01127 241 aaPredicted RBP16.04■□□□□ 0.16
SPG7-218ENST00000568205 SRPRAP08240 638 aaKnown RBP16.04■□□□□ 0.16
SPG7-218ENST00000568205 HNRNPLP14866 589 aaKnown RBP eCLIP16.04■□□□□ 0.16
SPG7-218ENST00000568205 STK19P49842 368 aaPredicted RBP16.04■□□□□ 0.16
SPG7-218ENST00000568205 GEMIN4P57678 1058 aaKnown RBP16.04■□□□□ 0.16
SPG7-218ENST00000568205 MRPS21P82921 87 aaKnown RBP16.04■□□□□ 0.16
SPG7-218ENST00000568205 OTUD4Q01804 1114 aaKnown RBP16.04■□□□□ 0.16
SPG7-218ENST00000568205 IL10RBQ08334 325 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 SLC20A2Q08357 652 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 NOMO1Q15155 1222 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 E2F5Q15329 346 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 LINGO4Q6UY18 593 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 CCDC105Q8IYK2 499 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 ZNF513Q8N8E2 541 aaPredicted RBP16.04■□□□□ 0.16
SPG7-218ENST00000568205 TTC13Q8NBP0 860 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 FLCNQ8NFG4 579 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 PJA1Q8NG27 643 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 USP33Q8TEY7 942 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 MS4A14Q96JA4 679 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 TSGA13Q96PP4 275 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 COL25A1Q9BXS0 654 aaPredicted RBP16.04■□□□□ 0.16
SPG7-218ENST00000568205 PDFQ9HBH1 243 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 TTC7AQ9ULT0 858 aaPredicted RBP16.04■□□□□ 0.16
SPG7-218ENST00000568205 PLA2G4CQ9UP65 541 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 HS3ST2Q9Y278 367 aa16.04■□□□□ 0.16
SPG7-218ENST00000568205 TNFRSF10AO00220 468 aa16.03■□□□□ 0.16
SPG7-218ENST00000568205 PGRMC1O00264 195 aaKnown RBP16.03■□□□□ 0.16
SPG7-218ENST00000568205 PPP1R12AO14974 1030 aaPredicted RBP16.03■□□□□ 0.16
SPG7-218ENST00000568205 NPC1O15118 1278 aa16.03■□□□□ 0.16
SPG7-218ENST00000568205 ZNF185O15231 689 aa16.03■□□□□ 0.16
SPG7-218ENST00000568205 MAFKO60675 156 aa16.03■□□□□ 0.16
SPG7-218ENST00000568205 MT-CO1P00395 513 aa16.03■□□□□ 0.16
SPG7-218ENST00000568205 TIE1P35590 1138 aa16.03■□□□□ 0.16
SPG7-218ENST00000568205 SERPINH1P50454 418 aaKnown RBP16.03■□□□□ 0.16
SPG7-218ENST00000568205 VASPP50552 380 aaPredicted RBP16.03■□□□□ 0.16
SPG7-218ENST00000568205 ST8SIA6P61647 398 aa16.03■□□□□ 0.16
SPG7-218ENST00000568205 FZD5Q13467 585 aa16.03■□□□□ 0.16
SPG7-218ENST00000568205 ZNF234Q14588 700 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms