RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	NUMB	P49757	651 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	PMS1	P54277	932 aa	Known RBP	11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	OXCT1	P55809	520 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	ERVPABLB-1	P60509	514 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	GABRE	P78334	506 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	NUCB2	P80303	420 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	POM121L1P	Q3SYA9	428 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	ARHGAP40	Q5TG30	622 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	ANKRD40	Q6AI12	368 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	LMO3	Q8TAP4	145 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	DEPDC7	Q96QD5	511 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	PPP1R9B	Q96SB3	815 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	TRIM62	Q9BVG3	475 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	SLC4A5	Q9BY07	1137 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	POLR1B	Q9H9Y6	1135 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	CPNE5	Q9HCH3	593 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	PREB	Q9HCU5	417 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	ASCL3	Q9NQ33	180 aa		11.71	□□□□□ -0.53
TCF4-238	ENST00000568169	LY6G6E	A0A0G2JKS1	128 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169		A0A1W2PQ27	194 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169		A0A1W2PQ64	194 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	CYSRT1	A8MQ03	144 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	KCNU1	A8MYU2	1149 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	C1QTNF3-AMACR	E9PGA6	284 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	SLC31A1	O15431	190 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	FFAR2	O15552	330 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	LZTS3	O60299	673 aa	Predicted RBP	11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	USP12	O75317	370 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	CS	O75390	466 aa	Known RBP	11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	GP1BA	P07359	652 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	HSP90AA1	P07900	732 aa	Known RBP	11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	PRLR	P16471	622 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	ACADSB	P45954	432 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	PITX1	P78337	314 aa	Predicted RBP	11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	KRT85	P78386	507 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	KCNMA1	Q12791	1236 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	DLG2	Q15700	870 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	ACCSL	Q4AC99	568 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	COBLL1	Q53SF7	1204 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	HS1BP3	Q53T59	392 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	PIP5KL1	Q5T9C9	394 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	NEK5	Q6P3R8	708 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169		Q6ZVU0	165 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	TMC6	Q7Z403	805 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	CIR1	Q86X95	450 aa	Predicted RBP	11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	PPM1K	Q8N3J5	372 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	ATP6V0D2	Q8N8Y2	350 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	OR52K2	Q8NGK3	314 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	STK32A	Q8WU08	396 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	KCNE4	Q8WWG9	221 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	TTC9	Q92623	222 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	APOLD1	Q96LR9	279 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	TSG101	Q99816	390 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	FEM1A	Q9BSK4	669 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	SEMA4C	Q9C0C4	833 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	GOLPH3L	Q9H4A5	285 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	CAAP1	Q9H8G2	361 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	ST7	Q9NRC1	585 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	SLC25A13	Q9UJS0	675 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	OR51B4	Q9Y5P0	310 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169		U3KQA8	63 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	TENM4	Q6N022	2769 aa		11.7	□□□□□ -0.54
TCF4-238	ENST00000568169	CHD5	Q8TDI0	1954 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169		A0A1W2PQU0	124 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169		B8ZZF3	427 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	KLK10	O43240	276 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	ZNF18	P17022	549 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	YWHAZ	P63104	245 aa	Known RBP	11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	VAC14	Q08AM6	782 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	ZNF284	Q2VY69	593 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	RABGAP1L	Q5R372	815 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	FBXL22	Q6P050	247 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	IGF2-AS	Q6U949	168 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	TMEM110	Q86TL2	294 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	HORMAD1	Q86X24	394 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	SH2D3C	Q8N5H7	860 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	FAM181A	Q8N9Y4	354 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	OR13H1	Q8NG92	308 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	KLK6	Q92876	244 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	IFT43	Q96FT9	208 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	VCPIP1	Q96JH7	1222 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	MYOC	Q99972	504 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	DPH1	Q9BZG8	443 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	THAP9	Q9H5L6	903 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	USP29	Q9HBJ7	922 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	POPDC2	Q9HBU9	364 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	METTL14	Q9HCE5	456 aa	Known RBP	11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	NLGN3	Q9NZ94	848 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	SLC12A6	Q9UHW9	1150 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	CNTN6	Q9UQ52	1028 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	PIEZO2	Q9H5I5	2752 aa		11.69	□□□□□ -0.54
TCF4-238	ENST00000568169	SCN8A	Q9UQD0	1980 aa		11.68	□□□□□ -0.54
TCF4-238	ENST00000568169	TRIM49B	A6NDI0	452 aa		11.68	□□□□□ -0.54
TCF4-238	ENST00000568169	NEMP2	A6NFY4	417 aa		11.68	□□□□□ -0.54
TCF4-238	ENST00000568169	SCAMP1	O15126	338 aa		11.68	□□□□□ -0.54
TCF4-238	ENST00000568169	CTSL	P07711	333 aa		11.68	□□□□□ -0.54
TCF4-238	ENST00000568169	ALPPL2	P10696	532 aa		11.68	□□□□□ -0.54

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