RNA–Protein interactions for RNA: ENST00000567264.1

UBFD1-208, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBFD1, Length 642 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-208ENST00000567264 ZNF687Q8N1G0 1237 aa23.21■■□□□ 1.31
UBFD1-208ENST00000567264 ATPAF2Q8N5M1 289 aa23.21■■□□□ 1.31
UBFD1-208ENST00000567264 ZNF513Q8N8E2 541 aaPredicted RBP23.21■■□□□ 1.31
UBFD1-208ENST00000567264 KCNV2Q8TDN2 545 aa23.21■■□□□ 1.31
UBFD1-208ENST00000567264 CYB5D2Q8WUJ1 264 aa23.21■■□□□ 1.31
UBFD1-208ENST00000567264 SORCS1Q8WY21 1168 aa23.21■■□□□ 1.31
UBFD1-208ENST00000567264 PBKQ96KB5 322 aa23.21■■□□□ 1.31
UBFD1-208ENST00000567264 SIT1Q9Y3P8 196 aa23.21■■□□□ 1.31
UBFD1-208ENST00000567264 RAD54BQ9Y620 910 aa23.21■■□□□ 1.31
UBFD1-208ENST00000567264 ZSCAN5CA6NGD5 496 aaPredicted RBP23.2■■□□□ 1.3
UBFD1-208ENST00000567264 CEP104O60308 925 aa23.2■■□□□ 1.3
UBFD1-208ENST00000567264 PDGFBP01127 241 aaPredicted RBP23.2■■□□□ 1.3
UBFD1-208ENST00000567264 SRPRAP08240 638 aaKnown RBP23.2■■□□□ 1.3
UBFD1-208ENST00000567264 GLDCP23378 1020 aa23.2■■□□□ 1.3
UBFD1-208ENST00000567264 TIE1P35590 1138 aa23.2■■□□□ 1.3
UBFD1-208ENST00000567264 CTSOP43234 321 aaPredicted RBP23.2■■□□□ 1.3
UBFD1-208ENST00000567264 NR2C2P49116 596 aa23.2■■□□□ 1.3
UBFD1-208ENST00000567264 GEMIN4P57678 1058 aaKnown RBP23.2■■□□□ 1.3
UBFD1-208ENST00000567264 C2orf27AQ580R0 203 aa23.2■■□□□ 1.3
UBFD1-208ENST00000567264 EMC10Q5UCC4 262 aa23.2■■□□□ 1.3
UBFD1-208ENST00000567264 EGFLAMQ63HQ2 1017 aa23.2■■□□□ 1.3
UBFD1-208ENST00000567264 TRMT11Q7Z4G4 463 aaKnown RBP23.2■■□□□ 1.3
UBFD1-208ENST00000567264 LRRC49Q8IUZ0 686 aa23.2■■□□□ 1.3
UBFD1-208ENST00000567264 TP53INP2Q8IXH6 220 aa23.2■■□□□ 1.3
UBFD1-208ENST00000567264 CCDC105Q8IYK2 499 aa23.2■■□□□ 1.3
UBFD1-208ENST00000567264 P3H4Q92791 437 aa23.2■■□□□ 1.3
UBFD1-208ENST00000567264 C16orf45Q96MC5 204 aaPredicted RBP23.2■■□□□ 1.3
UBFD1-208ENST00000567264 HERPUD2Q9BSE4 406 aa23.2■■□□□ 1.3
UBFD1-208ENST00000567264 SP110Q9HB58 689 aa23.2■■□□□ 1.3
UBFD1-208ENST00000567264 DTLQ9NZJ0 730 aa23.2■■□□□ 1.3
UBFD1-208ENST00000567264 SNX12Q9UMY4 172 aa23.2■■□□□ 1.3
UBFD1-208ENST00000567264 ERVW-1Q9UQF0 538 aa23.2■■□□□ 1.3
UBFD1-208ENST00000567264 NPC1O15118 1278 aa23.19■■□□□ 1.3
UBFD1-208ENST00000567264 MAP3K6O95382 1288 aa23.19■■□□□ 1.3
UBFD1-208ENST00000567264 CASQ1P31415 396 aa23.19■■□□□ 1.3
UBFD1-208ENST00000567264 NNMTP40261 264 aa23.19■■□□□ 1.3
UBFD1-208ENST00000567264 KIR2DL1P43626 348 aaPredicted RBP23.19■■□□□ 1.3
UBFD1-208ENST00000567264 GALNT2Q10471 571 aa23.19■■□□□ 1.3
UBFD1-208ENST00000567264 FNDC3BQ53EP0 1204 aaKnown RBP23.19■■□□□ 1.3
UBFD1-208ENST00000567264 NPNTQ6UXI9 565 aa23.19■■□□□ 1.3
UBFD1-208ENST00000567264 NYAP1Q6ZVC0 841 aa23.19■■□□□ 1.3
UBFD1-208ENST00000567264 SLC13A5Q86YT5 568 aaPredicted RBP23.19■■□□□ 1.3
UBFD1-208ENST00000567264 CCDC33Q8N5R6 958 aa23.19■■□□□ 1.3
UBFD1-208ENST00000567264 USP33Q8TEY7 942 aa23.19■■□□□ 1.3
UBFD1-208ENST00000567264 HAUS1Q96CS2 278 aa23.19■■□□□ 1.3
UBFD1-208ENST00000567264 OSBPL9Q96SU4 736 aa23.19■■□□□ 1.3
UBFD1-208ENST00000567264 THAP10Q9P2Z0 257 aaPredicted RBP23.19■■□□□ 1.3
UBFD1-208ENST00000567264 IPO11Q9UI26 975 aaKnown RBP23.19■■□□□ 1.3
UBFD1-208ENST00000567264 CHD5Q8TDI0 1954 aa23.18■■□□□ 1.3
UBFD1-208ENST00000567264 APOC4-APOC2K7ER74 178 aa23.18■■□□□ 1.3
UBFD1-208ENST00000567264 ZMPSTE24O75844 475 aa23.18■■□□□ 1.3
UBFD1-208ENST00000567264 APOC2P02655 101 aa23.18■■□□□ 1.3
UBFD1-208ENST00000567264 HNRNPLP14866 589 aaKnown RBP eCLIP23.18■■□□□ 1.3
UBFD1-208ENST00000567264 PECAM1P16284 738 aaPredicted RBP23.18■■□□□ 1.3
UBFD1-208ENST00000567264 TCP1P17987 556 aaKnown RBP23.18■■□□□ 1.3
UBFD1-208ENST00000567264 ARF5P84085 180 aa23.18■■□□□ 1.3
UBFD1-208ENST00000567264 SLC20A2Q08357 652 aa23.18■■□□□ 1.3
UBFD1-208ENST00000567264 SLC10A2Q12908 348 aaPredicted RBP23.18■■□□□ 1.3
UBFD1-208ENST00000567264 ZNF234Q14588 700 aa23.18■■□□□ 1.3
UBFD1-208ENST00000567264 PDK1Q15118 436 aa23.18■■□□□ 1.3
UBFD1-208ENST00000567264 CWF19L1Q69YN2 538 aaKnown RBP23.18■■□□□ 1.3
UBFD1-208ENST00000567264 SDE2Q6IQ49 451 aa23.18■■□□□ 1.3
UBFD1-208ENST00000567264 LINGO4Q6UY18 593 aa23.18■■□□□ 1.3
UBFD1-208ENST00000567264 SYT10Q6XYQ8 523 aa23.18■■□□□ 1.3
UBFD1-208ENST00000567264 CHPFQ8IZ52 775 aa23.18■■□□□ 1.3
UBFD1-208ENST00000567264 RPL10LQ96L21 214 aaKnown RBP23.18■■□□□ 1.3
UBFD1-208ENST00000567264 EPHX3Q9H6B9 360 aa23.18■■□□□ 1.3
UBFD1-208ENST00000567264 TECTAO75443 2155 aa23.18■■□□□ 1.3
UBFD1-208ENST00000567264 NUP205Q92621 2012 aa23.18■■□□□ 1.3
UBFD1-208ENST00000567264 CXorf51AA0A1B0GTR3 108 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 PPP1R12AO14974 1030 aaPredicted RBP23.17■■□□□ 1.3
UBFD1-208ENST00000567264 PRAMEF11O60813 436 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 GARSP41250 739 aaKnown RBP23.17■■□□□ 1.3
UBFD1-208ENST00000567264 STK19P49842 368 aaPredicted RBP23.17■■□□□ 1.3
UBFD1-208ENST00000567264 IL10RBQ08334 325 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 FZD5Q13467 585 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 PTPRNQ16849 979 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 HSF5Q4G112 596 aaPredicted RBP23.17■■□□□ 1.3
UBFD1-208ENST00000567264 PAPD7Q5XG87 772 aaKnown RBP23.17■■□□□ 1.3
UBFD1-208ENST00000567264 SERPINA13PQ6UXR4 307 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 ARHGAP36Q6ZRI8 547 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 ATP11CQ8NB49 1132 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 KDM1BQ8NB78 822 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 TTC13Q8NBP0 860 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 RPLP0P6Q8NHW5 317 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 PBXIP1Q96AQ6 731 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 CLDN23Q96B33 292 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 MRGPRX3Q96LB0 322 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 ZDHHC4Q9NPG8 344 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 SAE1Q9UBE0 346 aaPredicted RBP23.17■■□□□ 1.3
UBFD1-208ENST00000567264 HCN2Q9UL51 889 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 SLC8A2Q9UPR5 921 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 HS3ST2Q9Y278 367 aa23.17■■□□□ 1.3
UBFD1-208ENST00000567264 TTC28Q96AY4 2481 aa23.16■■□□□ 1.3
UBFD1-208ENST00000567264 ANTXRLA6NF34 631 aa23.16■■□□□ 1.3
UBFD1-208ENST00000567264 J3KR12 359 aa23.16■■□□□ 1.3
UBFD1-208ENST00000567264 KIF2AO00139 706 aaPredicted RBP23.16■■□□□ 1.3
UBFD1-208ENST00000567264 TUBB4AP04350 444 aa23.16■■□□□ 1.3
UBFD1-208ENST00000567264 AOC1P19801 751 aa23.16■■□□□ 1.3
UBFD1-208ENST00000567264 NTSR1P30989 418 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms