RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 DUS3LQ96G46 650 aaKnown RBP15.97■□□□□ 0.15
COMMD4-215ENST00000566843 AGAP3Q96P47 875 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 RANBP9Q96S59 729 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 MAGEB5Q9BZ81 275 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 OLAHQ9NV23 265 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 PIH1D1Q9NWS0 290 aaKnown RBP15.97■□□□□ 0.15
COMMD4-215ENST00000566843 UTP6Q9NYH9 597 aaKnown RBP15.97■□□□□ 0.15
COMMD4-215ENST00000566843 AP4E1Q9UPM8 1137 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 MYRFQ9Y2G1 1151 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 PCDHGA4Q9Y5G9 962 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 ARHGEF37A1IGU5 675 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 TRIM64CA6NLI5 447 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 FAM155AB1AL88 458 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-215ENST00000566843 F5H423 210 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-215ENST00000566843 STX16-NPEPL1H3BU86 382 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 MAGEB3O15480 346 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 ATP6V1G1O75348 118 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 GABBR2O75899 941 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 FARP2O94887 1054 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-215ENST00000566843 VAPBO95292 243 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 HNRNPCP07910 306 aaKnown RBP eCLIP15.97■□□□□ 0.15
COMMD4-215ENST00000566843 TFEBP19484 476 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 TFE3P19532 575 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-215ENST00000566843 CSRP3P50461 194 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 PRKAA1Q13131 559 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 TMEM132BQ14DG7 1078 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 CES3Q6UWW8 571 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 STRA8Q7Z7C7 330 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 TTC39CQ8N584 583 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 RNF148Q8N7C7 305 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 URGCPQ8TCY9 931 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 AGR3Q8TD06 166 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 TRPM4Q8TD43 1214 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 EME1Q96AY2 570 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 ZNF512Q96ME7 567 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-215ENST00000566843 TEPSINQ96N21 525 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 UHRF1Q96T88 793 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-215ENST00000566843 PNPLA3Q9NST1 481 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 SUCOQ9UBS9 1254 aaKnown RBP15.97■□□□□ 0.15
COMMD4-215ENST00000566843 CDYLQ9Y232 598 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 TNFSF13BQ9Y275 285 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 MFHAS1Q9Y4C4 1052 aa15.97■□□□□ 0.15
COMMD4-215ENST00000566843 PAPSS1O43252 624 aaPredicted RBP15.96■□□□□ 0.15
COMMD4-215ENST00000566843 B4GALT5O43286 388 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 C2P06681 752 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 FAM163BP0C2L3 166 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 UBA1P22314 1058 aaKnown RBP15.96■□□□□ 0.15
COMMD4-215ENST00000566843 NUP107P57740 925 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 LIPMQ5VYY2 423 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 TMEM151AQ8N4L1 468 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 SMYD1Q8NB12 490 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 ATP6V1E2Q96A05 226 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 HPDLQ96IR7 371 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 PHF12Q96QT6 1004 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 MCMBPQ9BTE3 642 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 NUF2Q9BZD4 464 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 OSBPL6Q9BZF3 934 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 IPO11Q9UI26 975 aaKnown RBP15.96■□□□□ 0.15
COMMD4-215ENST00000566843 BLOC1S6Q9UL45 172 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 SH3GLB1Q9Y371 365 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 AFG3L2Q9Y4W6 797 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 AP4S1Q9Y587 144 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 SBF1O95248 1867 aa15.96■□□□□ 0.15
COMMD4-215ENST00000566843 C9IYK1 514 aa15.96■□□□□ 0.14
COMMD4-215ENST00000566843 RNF103O00237 685 aa15.96■□□□□ 0.14
COMMD4-215ENST00000566843 PIGNO95427 931 aa15.96■□□□□ 0.14
COMMD4-215ENST00000566843 STAU1O95793 577 aaKnown RBP15.96■□□□□ 0.14
COMMD4-215ENST00000566843 HSPA1AP0DMV8 641 aaKnown RBP15.96■□□□□ 0.14
COMMD4-215ENST00000566843 HSPA1BP0DMV9 641 aaKnown RBP15.96■□□□□ 0.14
COMMD4-215ENST00000566843 GLUD2P49448 558 aa15.96■□□□□ 0.14
COMMD4-215ENST00000566843 ZDHHC17Q8IUH5 632 aa15.96■□□□□ 0.14
COMMD4-215ENST00000566843 LZTR1Q8N653 840 aa15.96■□□□□ 0.14
COMMD4-215ENST00000566843 ZBTB8BQ8NAP8 495 aaPredicted RBP15.96■□□□□ 0.14
COMMD4-215ENST00000566843 FAM167AQ96KS9 214 aa15.96■□□□□ 0.14
COMMD4-215ENST00000566843 LGMNQ99538 433 aa15.96■□□□□ 0.14
COMMD4-215ENST00000566843 NT5C1AQ9BXI3 368 aa15.96■□□□□ 0.14
COMMD4-215ENST00000566843 LRRC40Q9H9A6 602 aa15.96■□□□□ 0.14
COMMD4-215ENST00000566843 MRPL40Q9NQ50 206 aaKnown RBP15.96■□□□□ 0.14
COMMD4-215ENST00000566843 GPRC5DQ9NZD1 345 aa15.96■□□□□ 0.14
COMMD4-215ENST00000566843 IGSF9Q9P2J2 1179 aa15.96■□□□□ 0.14
COMMD4-215ENST00000566843 HACL1Q9UJ83 578 aa15.96■□□□□ 0.14
COMMD4-215ENST00000566843 ZNF701M0R085 212 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-215ENST00000566843 CABYRO75952 493 aa15.95■□□□□ 0.14
COMMD4-215ENST00000566843 SBK3P0C264 359 aa15.95■□□□□ 0.14
COMMD4-215ENST00000566843 PSMB4P28070 264 aa15.95■□□□□ 0.14
COMMD4-215ENST00000566843 CD97P48960 835 aa15.95■□□□□ 0.14
COMMD4-215ENST00000566843 CSE1LP55060 971 aaKnown RBP15.95■□□□□ 0.14
COMMD4-215ENST00000566843 FSTL1Q12841 308 aa15.95■□□□□ 0.14
COMMD4-215ENST00000566843 TRIM25Q14258 630 aaKnown RBP15.95■□□□□ 0.14
COMMD4-215ENST00000566843 DLG2Q15700 870 aa15.95■□□□□ 0.14
COMMD4-215ENST00000566843 ARL13AQ5H913 290 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-215ENST00000566843 TMEM198Q66K66 360 aa15.95■□□□□ 0.14
COMMD4-215ENST00000566843 TMEM135Q86UB9 458 aa15.95■□□□□ 0.14
COMMD4-215ENST00000566843 TTC30AQ86WT1 665 aa15.95■□□□□ 0.14
COMMD4-215ENST00000566843 CDR2LQ86X02 465 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-215ENST00000566843 ADAM32Q8TC27 787 aa15.95■□□□□ 0.14
COMMD4-215ENST00000566843 SLC35F5Q8WV83 523 aa15.95■□□□□ 0.14
COMMD4-215ENST00000566843 P2RY11Q96G91 374 aa15.95■□□□□ 0.14
COMMD4-215ENST00000566843 ACE2Q9BYF1 805 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-215ENST00000566843 LIN28AQ9H9Z2 209 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms