RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 EXOC4Q96A65 974 aa8.36□□□□□ -1.07
CDH13-208ENST00000566333 RBM41Q96IZ5 413 aaKnown RBP8.36□□□□□ -1.07
CDH13-208ENST00000566333 OLFM3Q96PB7 478 aa8.36□□□□□ -1.07
CDH13-208ENST00000566333 WDR24Q96S15 920 aa8.36□□□□□ -1.07
CDH13-208ENST00000566333 GABRG3Q99928 467 aa8.36□□□□□ -1.07
CDH13-208ENST00000566333 CIPCQ9C0C6 399 aa8.36□□□□□ -1.07
CDH13-208ENST00000566333 MUC3BQ9H195 1237 aa8.36□□□□□ -1.07
CDH13-208ENST00000566333 MAGEH1Q9H213 219 aa8.36□□□□□ -1.07
CDH13-208ENST00000566333 TMEM245Q9H330 911 aa8.36□□□□□ -1.07
CDH13-208ENST00000566333 MFSD1Q9H3U5 465 aa8.36□□□□□ -1.07
CDH13-208ENST00000566333 PDFQ9HBH1 243 aa8.36□□□□□ -1.07
CDH13-208ENST00000566333 POLR3BQ9NW08 1133 aaPredicted RBP8.36□□□□□ -1.07
CDH13-208ENST00000566333 ELOVL2Q9NXB9 296 aa8.36□□□□□ -1.07
CDH13-208ENST00000566333 THAP10Q9P2Z0 257 aaPredicted RBP8.36□□□□□ -1.07
CDH13-208ENST00000566333 VPS28Q9UK41 221 aa8.36□□□□□ -1.07
CDH13-208ENST00000566333 HS3ST2Q9Y278 367 aa8.36□□□□□ -1.07
CDH13-208ENST00000566333 SIT1Q9Y3P8 196 aa8.36□□□□□ -1.07
CDH13-208ENST00000566333 ACTL7AQ9Y615 435 aa8.36□□□□□ -1.07
CDH13-208ENST00000566333 MYLKQ15746 1914 aa8.36□□□□□ -1.07
CDH13-208ENST00000566333 DOCK9Q9BZ29 2069 aa8.36□□□□□ -1.07
CDH13-208ENST00000566333 TP53BP1Q12888 1972 aaPredicted RBP8.35□□□□□ -1.07
CDH13-208ENST00000566333 USP34Q70CQ2 3546 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 GOLGA6L9A6NEM1 432 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 CHURC1-FNTBB4DL54 471 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 SGK1O00141 431 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 APOL1O14791 398 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 DAPK3O43293 454 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 MAP3K6O95382 1288 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 KLF8O95600 359 aaPredicted RBP8.35□□□□□ -1.07
CDH13-208ENST00000566333 PEX11BO96011 259 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 MT-CO1P00395 513 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 ASLP04424 464 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 PECAM1P16284 738 aaPredicted RBP8.35□□□□□ -1.07
CDH13-208ENST00000566333 TIE1P35590 1138 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 ETFBP38117 255 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 DNA2P51530 1060 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 CLCN5P51795 746 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 YBEYP58557 167 aaPredicted RBP8.35□□□□□ -1.07
CDH13-208ENST00000566333 COPS2P61201 443 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 DYNLT1P63172 113 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 GALNT2Q10471 571 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 SLC10A2Q12908 348 aaPredicted RBP8.35□□□□□ -1.07
CDH13-208ENST00000566333 MTAPQ13126 283 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 KLF1Q13351 362 aaPredicted RBP8.35□□□□□ -1.07
CDH13-208ENST00000566333 POLD3Q15054 466 aaPredicted RBP8.35□□□□□ -1.07
CDH13-208ENST00000566333 LLGL1Q15334 1064 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 C2orf27AQ580R0 203 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 ZFYVE27Q5T4F4 411 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 NPNTQ6UXI9 565 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 LINGO4Q6UY18 593 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 BBS12Q6ZW61 710 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 CCDC117Q8IWD4 279 aaPredicted RBP8.35□□□□□ -1.07
CDH13-208ENST00000566333 RCOR2Q8IZ40 523 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 SYNPOQ8N3V7 929 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 CCDC33Q8N5R6 958 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 FRS2Q8WU20 508 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 PBXIP1Q96AQ6 731 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 VOPP1Q96AW1 172 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 RPL10LQ96L21 214 aaKnown RBP8.35□□□□□ -1.07
CDH13-208ENST00000566333 NELL2Q99435 816 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 C2orf49Q9BVC5 232 aaPredicted RBP8.35□□□□□ -1.07
CDH13-208ENST00000566333 SLC39A8Q9C0K1 460 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 CARD9Q9H257 536 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 LMAN1LQ9HAT1 526 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 ATP13A1Q9HD20 1204 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 PRMT8Q9NR22 394 aaPredicted RBP8.35□□□□□ -1.07
CDH13-208ENST00000566333 CACNA2D2Q9NY47 1150 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 DTLQ9NZJ0 730 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 MMP17Q9ULZ9 603 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 ERVW-1Q9UQF0 538 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 ZKSCAN5Q9Y2L8 839 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDH13-208ENST00000566333 SCN8AQ9UQD0 1980 aa8.35□□□□□ -1.07
CDH13-208ENST00000566333 LAMA1P25391 3075 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 CXorf51AA0A1B0GTR3 108 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 A0A1W2PQF6 199 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 TCRBV7S2A1N4TA0A589 114 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 PRR33A8MZF0 331 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 WASH3PC4AMC7 463 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 J3KR12 359 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 K7ERQ8 282 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 CBX4O00257 560 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 ENC1O14682 589 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 SMAD6O43541 496 aaKnown RBP8.34□□□□□ -1.07
CDH13-208ENST00000566333 KIF5CO60282 957 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 MAFKO60675 156 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 CST8O60676 142 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 PRAMEF11O60813 436 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 GPR37L1O60883 481 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 ZNF821O75541 412 aaPredicted RBP8.34□□□□□ -1.07
CDH13-208ENST00000566333 ZRANB2O95218 330 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDH13-208ENST00000566333 ATP1A1P05023 1023 aaKnown RBP8.34□□□□□ -1.07
CDH13-208ENST00000566333 SRPRAP08240 638 aaKnown RBP8.34□□□□□ -1.07
CDH13-208ENST00000566333 SRCP12931 536 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 TDGF1P13385 188 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 HLA-EP13747 358 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 VAV1P15498 845 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 POLR2EP19388 210 aaKnown RBP8.34□□□□□ -1.07
CDH13-208ENST00000566333 COL9A1P20849 921 aa8.34□□□□□ -1.07
CDH13-208ENST00000566333 SERPINB6P35237 376 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms