RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 ATP13A1Q9HD20 1204 aa10.97□□□□□ -0.65
UBFD1-205ENST00000566136 DDX43Q9NXZ2 648 aaKnown RBP10.97□□□□□ -0.65
UBFD1-205ENST00000566136 SELENONQ9NZV5 590 aa10.97□□□□□ -0.65
UBFD1-205ENST00000566136 SH3BP4Q9P0V3 963 aa10.97□□□□□ -0.65
UBFD1-205ENST00000566136 PCDHA12Q9UN75 941 aa10.97□□□□□ -0.65
UBFD1-205ENST00000566136 SOX13Q9UN79 622 aa10.97□□□□□ -0.65
UBFD1-205ENST00000566136 PVALEFA0A1B0GWK0 134 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 TCP10L2B9ZVM9 353 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 SOX1O00570 391 aaPredicted RBP10.96□□□□□ -0.65
UBFD1-205ENST00000566136 TMIGD3P0DMS9 266 aaPredicted RBP10.96□□□□□ -0.65
UBFD1-205ENST00000566136 CD9P21926 228 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 ADRA1BP35368 520 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 PBX3P40426 434 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 ACTR1AP61163 376 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 GSTM4Q03013 218 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 PLAURQ03405 335 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 ZBTB17Q13105 803 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 SNX1Q13596 522 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 NEDD9Q14511 834 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 SMU1Q2TAY7 513 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 SPRYD7Q5W111 196 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 CYFIP2Q96F07 1278 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 TRAPPC9Q96Q05 1148 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 PIP5K1AQ99755 562 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 CACNG6Q9BXT2 260 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 ERVMER34-1Q9H9K5 563 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 PGPEP1Q9NXJ5 209 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 CLCA3PQ9Y6N3 262 aa10.96□□□□□ -0.65
UBFD1-205ENST00000566136 F5H6K3 240 aa10.96□□□□□ -0.66
UBFD1-205ENST00000566136 EPHB6O15197 1021 aa10.96□□□□□ -0.66
UBFD1-205ENST00000566136 HRO43593 1189 aa10.96□□□□□ -0.66
UBFD1-205ENST00000566136 NPPAP01160 153 aa10.96□□□□□ -0.66
UBFD1-205ENST00000566136 NME5P56597 212 aa10.96□□□□□ -0.66
UBFD1-205ENST00000566136 VAMP2P63027 116 aa10.96□□□□□ -0.66
UBFD1-205ENST00000566136 CYP4F8P98187 520 aa10.96□□□□□ -0.66
UBFD1-205ENST00000566136 KLRC3Q07444 240 aa10.96□□□□□ -0.66
UBFD1-205ENST00000566136 RRP1BQ14684 758 aaKnown RBP10.96□□□□□ -0.66
UBFD1-205ENST00000566136 NHSL2Q5HYW2 709 aa10.96□□□□□ -0.66
UBFD1-205ENST00000566136 ABHD17AQ96GS6 310 aa10.96□□□□□ -0.66
UBFD1-205ENST00000566136 DMRTA2Q96SC8 542 aa10.96□□□□□ -0.66
UBFD1-205ENST00000566136 SLC30A3Q99726 388 aa10.96□□□□□ -0.66
UBFD1-205ENST00000566136 NAPGQ99747 312 aaPredicted RBP10.96□□□□□ -0.66
UBFD1-205ENST00000566136 IDI2Q9BXS1 227 aa10.96□□□□□ -0.66
UBFD1-205ENST00000566136 PARD6BQ9BYG5 372 aa10.96□□□□□ -0.66
UBFD1-205ENST00000566136 MMRN2Q9H8L6 949 aa10.96□□□□□ -0.66
UBFD1-205ENST00000566136 RPRD1BQ9NQG5 326 aaKnown RBP10.96□□□□□ -0.66
UBFD1-205ENST00000566136 PSD3Q9NYI0 1048 aa10.96□□□□□ -0.66
UBFD1-205ENST00000566136 NYAP2Q9P242 653 aa10.96□□□□□ -0.66
UBFD1-205ENST00000566136 NDUFB10O96000 172 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 GH2P01242 217 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 PLEKP08567 350 aaPredicted RBP10.95□□□□□ -0.66
UBFD1-205ENST00000566136 PNMA6AP0CW24 399 aaPredicted RBP10.95□□□□□ -0.66
UBFD1-205ENST00000566136 LAG3P18627 525 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 CDH3P22223 829 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 EPHA8P29322 1005 aaPredicted RBP10.95□□□□□ -0.66
UBFD1-205ENST00000566136 PLD1Q13393 1074 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 TRA2AQ13595 282 aaKnown RBP eCLIP10.95□□□□□ -0.66
UBFD1-205ENST00000566136 PRAMEF13Q5VWM6 474 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 FAM111BQ6SJ93 734 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 FBXW8Q8N3Y1 598 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 RAB7BQ96AH8 199 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 DNAJC19Q96DA6 116 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 SPXQ9BT56 116 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 CCDC106Q9BWC9 280 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 MOV10L1Q9BXT6 1211 aaKnown RBP10.95□□□□□ -0.66
UBFD1-205ENST00000566136 MAGEE1Q9HCI5 957 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 GPR27Q9NS67 375 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 FAM207AQ9NSI2 230 aaPredicted RBP10.95□□□□□ -0.66
UBFD1-205ENST00000566136 TNFSF13BQ9Y275 285 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 NOSIPQ9Y314 301 aaKnown RBP10.95□□□□□ -0.66
UBFD1-205ENST00000566136 ARHGEF37A1IGU5 675 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 DLL1O00548 723 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 MEIS2O14770 477 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 KLK10O43240 276 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 EXOC3O60645 756 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 GCFC2P16383 781 aaKnown RBP10.95□□□□□ -0.66
UBFD1-205ENST00000566136 GRK3P35626 688 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 PPP1R2P41236 205 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 ACTR2P61160 394 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 CYP27A1Q02318 531 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 KHDC1LQ5JSQ8 128 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 PET117Q6UWS5 81 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 RNF44Q7L0R7 432 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 KIAA1328Q86T90 577 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 NELFCDQ8IXH7 590 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 GUF1Q8N442 669 aaKnown RBP10.95□□□□□ -0.66
UBFD1-205ENST00000566136 CCDC155Q8N6L0 562 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 GPR161Q8N6U8 529 aaKnown RBP10.95□□□□□ -0.66
UBFD1-205ENST00000566136 GMCL1P1Q8NEA9 526 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 SLC4A5Q9BY07 1137 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 TMEM39BQ9GZU3 492 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 R3HDMLQ9H3Y0 253 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 NHEJ1Q9H9Q4 299 aaPredicted RBP10.95□□□□□ -0.66
UBFD1-205ENST00000566136 PANK4Q9NVE7 773 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 HDAC6Q9UBN7 1215 aa10.95□□□□□ -0.66
UBFD1-205ENST00000566136 ZMYND8Q9ULU4 1186 aaPredicted RBP10.95□□□□□ -0.66
UBFD1-205ENST00000566136 SMCHD1A6NHR9 2005 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 H0YCG3 227 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 MED24O75448 989 aa10.94□□□□□ -0.66
UBFD1-205ENST00000566136 TSPAN9O75954 239 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms