RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 SQLEQ14534 574 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 GPR162Q16538 588 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 PTPRNQ16849 979 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 DENND5BQ6ZUT9 1274 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 ZDHHC17Q8IUH5 632 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 FAM20CQ8IXL6 584 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 MCFD2Q8NI22 146 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 HM13Q8TCT9 377 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 FRMD6Q96NE9 622 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 CST11Q9H112 138 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 DCP1AQ9NPI6 582 aaPredicted RBP5.17□□□□□ -1.58
SMG1-211ENST00000565324 TBC1D24Q9ULP9 559 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 WDR37Q9Y2I8 494 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 RNF17Q9BXT8 1623 aaKnown RBP5.17□□□□□ -1.58
SMG1-211ENST00000565324 SLC2A4P14672 509 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 NMT1P30419 496 aaKnown RBP5.17□□□□□ -1.58
SMG1-211ENST00000565324 ELF3P78545 371 aaPredicted RBP5.17□□□□□ -1.58
SMG1-211ENST00000565324 KCNA10Q16322 511 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 RFTN2Q52LD8 501 aaPredicted RBP5.17□□□□□ -1.58
SMG1-211ENST00000565324 ARHGAP36Q6ZRI8 547 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 SNX32Q86XE0 403 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 PLCZ1Q86YW0 608 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 BHLHE22Q8NFJ8 381 aaPredicted RBP5.17□□□□□ -1.58
SMG1-211ENST00000565324 TEX47Q8TBZ9 253 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 MMP19Q99542 508 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 SLC6A15Q9H2J7 730 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 CYP4F12Q9HCS2 524 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 MRPS7Q9Y2R9 242 aaKnown RBP5.17□□□□□ -1.58
SMG1-211ENST00000565324 EFCAB6Q5THR3 1501 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 H7C4K7 107 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 ORC5O43913 435 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 GRAP2O75791 330 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 CAMTA2O94983 1202 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 CASP1P29466 404 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 RBM34P42696 430 aaKnown RBP5.17□□□□□ -1.58
SMG1-211ENST00000565324 FMR1Q06787 632 aaKnown RBP eCLIP5.17□□□□□ -1.582e-6■■□□□ 12.9
SMG1-211ENST00000565324 DDR1Q08345 913 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 ST3GAL1Q11201 340 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 PLCL1Q15111 1095 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 GRHL2Q6ISB3 625 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 RAD9BQ6WBX8 426 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 TMPRSS11AQ6ZMR5 421 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 PNPT1Q8TCS8 783 aaKnown RBP5.17□□□□□ -1.58
SMG1-211ENST00000565324 NELL1Q92832 810 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 AP1S3Q96PC3 154 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 PANX3Q96QZ0 392 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 LEF1Q9UJU2 399 aaPredicted RBP5.17□□□□□ -1.58
SMG1-211ENST00000565324 ANGPT4Q9Y264 503 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 TELO2Q9Y4R8 837 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 TAF6LQ9Y6J9 622 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 PNPLA7Q6ZV29 1317 aa5.17□□□□□ -1.58
SMG1-211ENST00000565324 RIPK2O43353 540 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 IFNA16P05015 189 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 RFX3P48380 749 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 POLR2LP62875 67 aaKnown RBP5.16□□□□□ -1.58
SMG1-211ENST00000565324 TXNDC11Q6PKC3 985 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 PAGE2Q7Z2X7 111 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 HPS6Q86YV9 775 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 C10orf107Q8IVU9 208 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 PGBD3Q8N328 593 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 BHMTQ93088 406 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 VAT1Q99536 393 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 RIT2Q99578 217 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 RAB26Q9ULW5 256 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 FRMPD1Q5SYB0 1578 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 FAM25EA8MYX2 175 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 DNAJA2O60884 412 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 RLN1P04808 185 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 QSOX2Q6ZRP7 698 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 BPIFB6Q8NFQ5 453 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 PIWIL2Q8TC59 973 aaKnown RBP5.16□□□□□ -1.58
SMG1-211ENST00000565324 KBTBD7Q8WVZ9 684 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 DNAJA4Q8WW22 397 aaPredicted RBP5.16□□□□□ -1.58
SMG1-211ENST00000565324 PIH1D2Q8WWB5 315 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 TBCBQ99426 244 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 CCDC167Q9P0B6 97 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 PP2D1A8MPX8 630 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 F5H5T6 163 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 CDK9P50750 372 aaKnown RBP5.16□□□□□ -1.58
SMG1-211ENST00000565324 GRAPQ13588 217 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 ERMARDQ5T6L9 678 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 LRRC69Q6ZNQ3 347 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 OFCC1Q8IZS5 231 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 GRAPLQ8TC17 118 aaPredicted RBP5.16□□□□□ -1.58
SMG1-211ENST00000565324 PRCCQ92733 491 aaPredicted RBP5.16□□□□□ -1.58
SMG1-211ENST00000565324 MED8Q96G25 268 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 RNF146Q9NTX7 359 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 TRNAU1APQ9NX07 287 aaKnown RBP5.16□□□□□ -1.58
SMG1-211ENST00000565324 GIN1Q9NXP7 522 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 RAB21Q9UL25 225 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 CDH7Q9ULB5 785 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 KPNA3O00505 521 aaPredicted RBP5.16□□□□□ -1.58
SMG1-211ENST00000565324 TFECO14948 347 aaPredicted RBP5.16□□□□□ -1.58
SMG1-211ENST00000565324 MAGEB3O15480 346 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 PGAM1P18669 254 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 NTSP30990 170 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 RPL10AP62906 217 aaKnown RBP5.16□□□□□ -1.58
SMG1-211ENST00000565324 SLC9A4Q6AI14 798 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 MFSD7Q6UXD7 560 aa5.16□□□□□ -1.58
SMG1-211ENST00000565324 RAB11FIP2Q7L804 512 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms