RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 NAPEPLDQ6IQ20 393 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 Q6ZVU0 165 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 SLC26A9Q7LBE3 791 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 SLC47A2Q86VL8 602 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 TMPRSS12Q86WS5 348 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 CREBRFQ8IUR6 639 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 SH2D3CQ8N5H7 860 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 PDCD7Q8N8D1 485 aaKnown RBP8.82□□□□□ -1
CAPN3-213ENST00000565173 MFSD2AQ8NA29 543 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 C1orf131Q8NDD1 294 aaKnown RBP8.82□□□□□ -1
CAPN3-213ENST00000565173 ZNF397Q8NF99 534 aaPredicted RBP8.82□□□□□ -1
CAPN3-213ENST00000565173 HNRNPLLQ8WVV9 542 aaKnown RBP8.82□□□□□ -1
CAPN3-213ENST00000565173 RNF34Q969K3 372 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 CNDP2Q96KP4 475 aaKnown RBP8.82□□□□□ -1
CAPN3-213ENST00000565173 PSMB7Q99436 277 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 NPY6RQ99463 290 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 SCUBE2Q9NQ36 999 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 PLCB1Q9NQ66 1216 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 PIGVQ9NUD9 493 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 ARHGEF38Q9NXL2 777 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 DNAJC12Q9UKB3 198 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 TPX2Q9ULW0 747 aaKnown RBP8.82□□□□□ -1
CAPN3-213ENST00000565173 HS3ST2Q9Y278 367 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 ACACAQ13085 2346 aa8.82□□□□□ -1
CAPN3-213ENST00000565173 FASNP49327 2511 aaKnown RBP8.81□□□□□ -1
CAPN3-213ENST00000565173 ATMQ13315 3056 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 A0A087WV48 116 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 K7ERQ8 282 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 M0QYT0 321 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 ALOX15BO15296 676 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 YKT6O15498 198 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 CLDN11O75508 207 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 DAB1O75553 588 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 CNTN5O94779 1100 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 CTSLP07711 333 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 C1SP09871 688 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 SRCP12931 536 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 CDH5P33151 784 aaPredicted RBP8.81□□□□□ -1
CAPN3-213ENST00000565173 CXCR3P49682 368 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 ACADVLP49748 655 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 CDH4P55283 916 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 PTK2Q05397 1052 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 MTA1Q13330 715 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 ACCSLQ4AC99 568 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 ALFQ53S48 1182 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 PIP5KL1Q5T9C9 394 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 FAM46CQ5VWP2 391 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 DSG4Q86SJ6 1040 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 PRPF39Q86UA1 669 aaKnown RBP8.81□□□□□ -1
CAPN3-213ENST00000565173 PDZD3Q86UT5 571 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 IQCHQ86VS3 1027 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 TRIM69Q86WT6 500 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 FAM71AQ8IYT1 594 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 EID2Q8N6I1 236 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 OR2A12Q8NGT7 310 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 PIP4K2CQ8TBX8 421 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 OR8D1Q8WZ84 308 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 PGAP3Q96FM1 320 aaPredicted RBP8.81□□□□□ -1
CAPN3-213ENST00000565173 PPP1R9BQ96SB3 815 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 SIK2Q9H0K1 926 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 WDCPQ9H6R7 721 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 DMTF1Q9Y222 760 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 SNX10Q9Y5X0 201 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 GOLGA4Q13439 2230 aaKnown RBP8.81□□□□□ -1
CAPN3-213ENST00000565173 DOCK9Q9BZ29 2069 aa8.81□□□□□ -1
CAPN3-213ENST00000565173 URB1O60287 2271 aaKnown RBP8.8□□□□□ -1
CAPN3-213ENST00000565173 GCN1Q92616 2671 aaKnown RBP8.8□□□□□ -1
CAPN3-213ENST00000565173 ARID1BQ8NFD5 2236 aaPredicted RBP8.8□□□□□ -1
CAPN3-213ENST00000565173 MGAQ8IWI9 3026 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 IGLV3-10A0A075B6K4 115 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 A0A0D9SEW6 157 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 E9PAM4 449 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 SMAD6O43541 496 aaKnown RBP8.8□□□□□ -1
CAPN3-213ENST00000565173 SNAP91O60641 907 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 ZNF821O75541 412 aaPredicted RBP8.8□□□□□ -1
CAPN3-213ENST00000565173 CDK4P11802 303 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 KRT9P35527 623 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 NUDT1P36639 197 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 GABRB2P47870 512 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 ARRB1P49407 418 aaPredicted RBP8.8□□□□□ -1
CAPN3-213ENST00000565173 KCNMA1Q12791 1236 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 OVGP1Q12889 678 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 TARDBPQ13148 414 aaKnown RBP eCLIP8.8□□□□□ -1
CAPN3-213ENST00000565173 STAT4Q14765 748 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 SLC45A4Q5BKX6 768 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 MIIPQ5JXC2 388 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 BRMS1LQ5PSV4 323 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 FBXL19Q6PCT2 694 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 BNIPLQ7Z465 357 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 ZDHHC17Q8IUH5 632 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 SLC25A45Q8N413 288 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 MLKLQ8NB16 471 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 TMEM145Q8NBT3 493 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 CRELD1Q96HD1 420 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 C1orf74Q96LT6 269 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 BBC3Q96PG8 261 aaPredicted RBP8.8□□□□□ -1
CAPN3-213ENST00000565173 NOX5Q96PH1 765 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 TBCBQ99426 244 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 TKTL2Q9H0I9 626 aa8.8□□□□□ -1
CAPN3-213ENST00000565173 MUC3BQ9H195 1237 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms