RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 PRKCBP05771 671 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 PGK2P07205 417 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 CHRM5P08912 532 aaPredicted RBP5.14□□□□□ -1.59
SMG1-206ENST00000562668 XRCC6P12956 609 aaKnown RBP eCLIP5.14□□□□□ -1.59
SMG1-206ENST00000562668 ADORA2AP29274 412 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 KIF5BP33176 963 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 COPB2P35606 906 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 GNAQP50148 359 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 HSD17B4P51659 736 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 PRMT2P55345 433 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 KRTAP10-9P60411 292 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 CCNA1P78396 465 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 CNTN2Q02246 1040 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 KRT17Q04695 432 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 FGL2Q14314 439 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 ZNF267Q14586 743 aaPredicted RBP5.14□□□□□ -1.59
SMG1-206ENST00000562668 ANKRD1Q15327 319 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 NPY5RQ15761 445 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 PFKFB3Q16875 520 aaPredicted RBP5.14□□□□□ -1.59
SMG1-206ENST00000562668 ZIK1Q3SY52 487 aaPredicted RBP5.14□□□□□ -1.59
SMG1-206ENST00000562668 MGAT5BQ3V5L5 792 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 FBXO46Q6PJ61 603 aaPredicted RBP5.14□□□□□ -1.59
SMG1-206ENST00000562668 ZNF280BQ86YH2 543 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 DENND1CQ8IV53 801 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 CNGA4Q8IV77 575 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 GALNT4Q8N4A0 578 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 NECAB1Q8N987 351 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 TERB1Q8NA31 727 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 TRPV1Q8NER1 839 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 MORC4Q8TE76 937 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 DIS3LQ8TF46 1054 aaKnown RBP5.14□□□□□ -1.59
SMG1-206ENST00000562668 PHKBQ93100 1093 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 LENG8Q96PV6 779 aaPredicted RBP5.14□□□□□ -1.59
SMG1-206ENST00000562668 RNF26Q9BY78 433 aaPredicted RBP5.14□□□□□ -1.59
SMG1-206ENST00000562668 BRINP2Q9C0B6 783 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 MAF1Q9H063 256 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 VPS16Q9H269 839 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 ACAD9Q9H845 621 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 TRMT13Q9NUP7 481 aaKnown RBP5.14□□□□□ -1.59
SMG1-206ENST00000562668 PIH1D1Q9NWS0 290 aaKnown RBP5.14□□□□□ -1.59
SMG1-206ENST00000562668 TUBA8Q9NY65 449 aaPredicted RBP5.14□□□□□ -1.59
SMG1-206ENST00000562668 CCPG1Q9ULG6 757 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 DDX49Q9Y6V7 483 aaKnown RBP5.14□□□□□ -1.59
SMG1-206ENST00000562668 KIAA1217Q5T5P2 1943 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 FRMPD4Q14CM0 1322 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 STK36Q9NRP7 1315 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 CENPFP49454 3210 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 A0A087WWL8 130 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 KCNAB3O43448 404 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 EXOC3O60645 756 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 SNAI1O95863 264 aaPredicted RBP5.13□□□□□ -1.59
SMG1-206ENST00000562668 CYP2B6P20813 491 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 RGS2P41220 211 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 RENBPP51606 427 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 RPS6P62753 249 aaKnown RBP5.13□□□□□ -1.59
SMG1-206ENST00000562668 IKQ13123 557 aaPredicted RBP5.13□□□□□ -1.59
SMG1-206ENST00000562668 STK3Q13188 491 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 BAATQ14032 418 aaPredicted RBP5.13□□□□□ -1.59
SMG1-206ENST00000562668 PKN2Q16513 984 aaKnown RBP5.13□□□□□ -1.59
SMG1-206ENST00000562668 CYP1B1Q16678 543 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 PTPROQ16827 1216 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 USH1GQ495M9 461 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 L1TD1Q5T7N2 865 aaKnown RBP5.13□□□□□ -1.59
SMG1-206ENST00000562668 MIS18BP1Q6P0N0 1132 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 SYNE3Q6ZMZ3 975 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 DPY19L3Q6ZPD9 716 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 GAS2L3Q86XJ1 694 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 KBTBD7Q8WVZ9 684 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 RRP36Q96EU6 259 aaKnown RBP5.13□□□□□ -1.59
SMG1-206ENST00000562668 ZNF333Q96JL9 665 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 AIFM3Q96NN9 605 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 DPCDQ9BVM2 203 aaPredicted RBP5.13□□□□□ -1.59
SMG1-206ENST00000562668 TRIM54Q9BYV2 358 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 BARHL2Q9NY43 387 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 ELOVL5Q9NYP7 299 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 FBXO40Q9UH90 709 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 PNMA2Q9UL42 364 aa5.13□□□□□ -1.59
SMG1-206ENST00000562668 A0A088AWK7 358 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 CCDC196A0A1B0GTZ2 297 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 ESYT2A0FGR8 921 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 E5RJQ4 531 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 H3BML4 177 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 JAK2O60674 1132 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 CYBAP13498 195 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 SCG2P13521 617 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 FPR3P25089 353 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 HOXD10P28358 340 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 DGKEP52429 567 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 E2F1Q01094 437 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 CUL4AQ13619 759 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 KCTD2Q14681 263 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 DAZAP2Q15038 168 aaPredicted RBP5.12□□□□□ -1.59
SMG1-206ENST00000562668 TMEM63BQ5T3F8 832 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 LMBRD2Q68DH5 695 aaPredicted RBP5.12□□□□□ -1.59
SMG1-206ENST00000562668 USP17L6PQ6QN14 398 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 SERPINA13PQ6UXR4 307 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 ZNF783Q6ZMS7 281 aa5.12□□□□□ -1.59
SMG1-206ENST00000562668 NOL8Q76FK4 1167 aaKnown RBP5.12□□□□□ -1.59
SMG1-206ENST00000562668 CAND1Q86VP6 1230 aaKnown RBP5.12□□□□□ -1.59
SMG1-206ENST00000562668 IZUMO1Q8IYV9 350 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms