RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 IFNAR2P48551 515 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 RENBPP51606 427 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 OXCT1P55809 520 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 TNK2Q07912 1038 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 ZBTB17Q13105 803 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 HNRNPDQ14103 355 aaKnown RBP14.59□□□□□ -0.07
COMMD4-205ENST00000562310 MPPE1Q53F39 396 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 HSP90B2PQ58FF3 399 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 FAXCQ5TGI0 409 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 TMCO4Q5TGY1 634 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 TMEM184AQ6ZMB5 413 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 CROCCP2Q86T23 111 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 ZNF354CQ86Y25 554 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 CCDC117Q8IWD4 279 aaPredicted RBP14.59□□□□□ -0.07
COMMD4-205ENST00000562310 IQCKQ8N0W5 287 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 TAB3Q8N5C8 712 aaPredicted RBP14.59□□□□□ -0.07
COMMD4-205ENST00000562310 EFHBQ8N7U6 833 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 SH3RF2Q8TEC5 729 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 ARHGEF2Q92974 986 aaKnown RBP14.59□□□□□ -0.07
COMMD4-205ENST00000562310 CDC42EP4Q9H3Q1 356 aaKnown RBP14.59□□□□□ -0.07
COMMD4-205ENST00000562310 SAYSD1Q9NPB0 183 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 MED4Q9NPJ6 270 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 TDP1Q9NUW8 608 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 TBC1D14Q9P2M4 693 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 PLAAQ9Y263 795 aa14.59□□□□□ -0.07
COMMD4-205ENST00000562310 AP3B1O00203 1094 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 NRG2O14511 850 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-205ENST00000562310 ALOX15BO15296 676 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 ZBTB24O43167 697 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-205ENST00000562310 RIPK2O43353 540 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 TSPAN3O60637 253 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 PRAMEF11O60813 436 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 TBL1XO60907 577 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 ANXA9O76027 345 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 LUC7L3O95232 432 aaKnown RBP14.58□□□□□ -0.08
COMMD4-205ENST00000562310 TTC4O95801 387 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 CYBBP04839 570 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 ABHD2P08910 425 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 TSHRP16473 764 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 CEBPBP17676 345 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 MAGEA4P43358 317 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 NTHL1P78549 312 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 ZXDBP98169 803 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 PDIA2Q13087 525 aaKnown RBP14.58□□□□□ -0.08
COMMD4-205ENST00000562310 ARHGAP36Q6ZRI8 547 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 KLHDC8BQ8IXV7 354 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 BBS5Q8N3I7 341 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 GOLGA6L1Q8N7Z2 621 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 ZNF557Q8N988 423 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-205ENST00000562310 TDRD5Q8NAT2 981 aaKnown RBP14.58□□□□□ -0.08
COMMD4-205ENST00000562310 VN1R2Q8NFZ6 395 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 ZSCAN18Q8TBC5 510 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-205ENST00000562310 USP13Q92995 863 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-205ENST00000562310 OTUB2Q96DC9 234 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 LRRC39Q96DD0 335 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 TMA16Q96EY4 203 aaKnown RBP14.58□□□□□ -0.08
COMMD4-205ENST00000562310 ZIM3Q96PE6 472 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 CEP41Q9BYV8 373 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 SEMA4AQ9H3S1 761 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 NINJ2Q9NZG7 142 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 LMCD1Q9NZU5 365 aa14.58□□□□□ -0.08
COMMD4-205ENST00000562310 TCRBV7S3A2A0A539 114 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 GOLGA8MH3BSY2 632 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 TRDMT1O14717 391 aaKnown RBP14.57□□□□□ -0.08
COMMD4-205ENST00000562310 SLC9A3R1O14745 358 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-205ENST00000562310 CACNG3O60359 315 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 AP2A1O95782 977 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 NFKB1P19838 968 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 SGSHP51688 502 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 CDH18Q13634 790 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 RFTN1Q14699 578 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-205ENST00000562310 ZNF77Q15935 545 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 CCDC38Q502W7 563 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 MARC1Q5VT66 337 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 RNF43Q68DV7 783 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 TMC5Q6UXY8 1006 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 BBS7Q8IWZ6 715 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 TEX26Q8N6G2 289 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 ATP11CQ8NB49 1132 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 AGAP3Q96P47 875 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 SERPINB12Q96P63 405 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 FCRL5Q96RD9 977 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 EPB41L4BQ9H329 900 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 LRRC40Q9H9A6 602 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 GLOD4Q9HC38 313 aa14.57□□□□□ -0.08
COMMD4-205ENST00000562310 DNAJC17Q9NVM6 304 aaKnown RBP14.57□□□□□ -0.08
COMMD4-205ENST00000562310 RBM22Q9NW64 420 aaKnown RBP eCLIP14.57□□□□□ -0.08
COMMD4-205ENST00000562310 AAR2Q9Y312 384 aaKnown RBP14.57□□□□□ -0.08
COMMD4-205ENST00000562310 TMEM265A0A087WTH1 108 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 A0A1W2PPC1 479 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 GOLGA6L10A6NI86 522 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 H0Y626 953 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 KDELR3O43731 214 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 SPAG6O75602 509 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 SUN1O94901 812 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 PEX11BO96011 259 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 HOXB8P17481 243 aaPredicted RBP14.56□□□□□ -0.08
COMMD4-205ENST00000562310 FSHRP23945 695 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 HOXD9P28356 352 aaPredicted RBP14.56□□□□□ -0.08
COMMD4-205ENST00000562310 CD68P34810 354 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms