RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 KLRG1Q96E93 195 aa7.4□□□□□ -1.22
CDH1-203ENST00000561751 SLC39A13Q96H72 371 aa7.4□□□□□ -1.22
CDH1-203ENST00000561751 REXO5Q96IC2 774 aaKnown RBP7.4□□□□□ -1.22
CDH1-203ENST00000561751 ZNF594Q96JF6 807 aaPredicted RBP7.4□□□□□ -1.22
CDH1-203ENST00000561751 FAM111AQ96PZ2 611 aa7.4□□□□□ -1.22
CDH1-203ENST00000561751 VPS35Q96QK1 796 aa7.4□□□□□ -1.22
CDH1-203ENST00000561751 CIB1Q99828 191 aa7.4□□□□□ -1.22
CDH1-203ENST00000561751 PKP2Q99959 881 aa7.4□□□□□ -1.22
CDH1-203ENST00000561751 NUP85Q9BW27 656 aa7.4□□□□□ -1.22
CDH1-203ENST00000561751 MKRN2Q9H000 416 aaKnown RBP7.4□□□□□ -1.22
CDH1-203ENST00000561751 INTS2Q9H0H0 1204 aaKnown RBP7.4□□□□□ -1.22
CDH1-203ENST00000561751 SMYD3Q9H7B4 428 aa7.4□□□□□ -1.22
CDH1-203ENST00000561751 DMAC2Q9NW81 257 aa7.4□□□□□ -1.22
CDH1-203ENST00000561751 SYBUQ9NX95 663 aa7.4□□□□□ -1.22
CDH1-203ENST00000561751 PKD2L2Q9NZM6 624 aa7.4□□□□□ -1.22
CDH1-203ENST00000561751 ARPP21Q9UBL0 812 aaPredicted RBP7.4□□□□□ -1.22
CDH1-203ENST00000561751 VANGL2Q9ULK5 521 aa7.4□□□□□ -1.22
CDH1-203ENST00000561751 KIAA1024Q9UPX6 916 aa7.4□□□□□ -1.22
CDH1-203ENST00000561751 SUGT1Q9Y2Z0 365 aa7.4□□□□□ -1.22
CDH1-203ENST00000561751 PCDHB11Q9Y5F2 797 aa7.4□□□□□ -1.22
CDH1-203ENST00000561751 KIAA1551Q9HCM1 1747 aa7.4□□□□□ -1.23
CDH1-203ENST00000561751 UBR3Q6ZT12 1888 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 PLIN4Q96Q06 1357 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 C1orf232A0A0U1RR37 186 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 A0A1W2PPW3 197 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 C16orf96A6NNT2 1141 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 SLCO1B7G3V0H7 640 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 TRIM38O00635 465 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 PAPSS1O43252 624 aaPredicted RBP7.39□□□□□ -1.23
CDH1-203ENST00000561751 ZW10O43264 779 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 H2AFYO75367 372 aaKnown RBP7.39□□□□□ -1.23
CDH1-203ENST00000561751 SNX4O95219 450 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 JUNP05412 331 aaKnown RBP7.39□□□□□ -1.23
CDH1-203ENST00000561751 INHBAP08476 426 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 PLA2G4BP0C869 781 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 MBL2P11226 248 aaPredicted RBP7.39□□□□□ -1.23
CDH1-203ENST00000561751 PTPN1P18031 435 aaKnown RBP7.39□□□□□ -1.23
CDH1-203ENST00000561751 IRS1P35568 1242 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 BMPR1AP36894 532 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 ECE1P42892 770 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 GABRB2P47870 512 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 PRKAA2P54646 552 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 PEX3P56589 373 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 CTBSQ01459 385 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 TRAF2Q12933 501 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 KLF10Q13118 480 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 BAMBIQ13145 260 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 STILQ15468 1287 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 PTPROQ16827 1216 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 SHROOM1Q2M3G4 852 aaPredicted RBP7.39□□□□□ -1.23
CDH1-203ENST00000561751 LETM2Q2VYF4 491 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 LRIT3Q3SXY7 679 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 SLC36A3Q495N2 470 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 FGD3Q5JSP0 725 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 ZNF484Q5JVG2 852 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 CCNYL2Q5T2Q4 361 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 GTF2IRD2BQ6EKJ0 949 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 GALNT18Q6P9A2 607 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 ZNF773Q6PK81 442 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 XKRXQ6PP77 449 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 ABRAXAS1Q6UWZ7 409 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 TMC5Q6UXY8 1006 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 LDHAL6AQ6ZMR3 332 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 C15orf52Q6ZUT6 534 aaKnown RBP7.39□□□□□ -1.23
CDH1-203ENST00000561751 GSTA5Q7RTV2 222 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 GTF2IRD2Q86UP8 949 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 LIX1LQ8IVB5 337 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 HERC6Q8IVU3 1022 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 PALM2Q8IXS6 379 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 FAM71AQ8IYT1 594 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 ELMOD2Q8IZ81 293 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 TNS4Q8IZW8 715 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 PDIK1LQ8N165 341 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 SIX5Q8N196 739 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 LCORLQ8N3X6 602 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 SFRP1Q8N474 314 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 NATD1Q8N6N6 113 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 GALNT6Q8NCL4 622 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 VPS37AQ8NEZ2 397 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 LMO3Q8TAP4 145 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 CAPSLQ8WWF8 208 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 SLC5A5Q92911 643 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 ATP2A3Q93084 1043 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 LRRC39Q96DD0 335 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 ASB9Q96DX5 294 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 CEP295NLQ96MC4 621 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 RPRD1AQ96P16 312 aaPredicted RBP7.39□□□□□ -1.23
CDH1-203ENST00000561751 CDK5RAP1Q96SZ6 601 aaKnown RBP7.39□□□□□ -1.23
CDH1-203ENST00000561751 SORT1Q99523 831 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 CLSTN3Q9BQT9 956 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 UQCC2Q9BRT2 126 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 DCUN1D5Q9BTE7 237 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 B3GNT4Q9C0J1 378 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 SNX25Q9H3E2 840 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 ACAD9Q9H845 621 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 COQ10BQ9H8M1 238 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 EFCAB1Q9HAE3 211 aa7.39□□□□□ -1.23
CDH1-203ENST00000561751 RAVER2Q9HCJ3 691 aaKnown RBP7.39□□□□□ -1.23
CDH1-203ENST00000561751 XAB2Q9HCS7 855 aaKnown RBP7.39□□□□□ -1.23
CDH1-203ENST00000561751 TM9SF3Q9HD45 589 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms