RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 C11orf74Q86VG3 221 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 ZNF683Q8IZ20 524 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 ZNF564Q8TBZ8 553 aaPredicted RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 NTAN1Q96AB6 310 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 CELF6Q96J87 481 aaKnown RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 HSPA12BQ96MM6 686 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 SNRNP25Q9BV90 132 aaKnown RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 SEMA4GQ9NTN9 838 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 NDFIP2Q9NV92 336 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 IP6K2Q9UHH9 426 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 VPS51Q9UID3 782 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 NCKAP1Q9Y2A7 1128 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 TBC1D30Q9Y2I9 924 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 ACTL7AQ9Y615 435 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 MYO15AQ9UKN7 3530 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 GPR179Q6PRD1 2367 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 IGLV3-10A0A075B6K4 115 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 A0A1W2PP55 124 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 ILVBLA1L0T0 632 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 PLK4O00444 970 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 MID1O15344 667 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 BUB1O43683 1085 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 CYP1A2P05177 515 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 TCF4P15884 667 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 ITPKAP23677 461 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 CD6P30203 668 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 L1CAMP32004 1257 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 SLC8A1P32418 973 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 ZNF33AQ06730 810 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 ENPP2Q13822 863 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 KRT81Q14533 505 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 MESDQ14696 234 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 C5orf22Q49AR2 442 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 C9orf64Q5T6V5 341 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 LYSMD4Q5XG99 296 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 PMS2CLQ68D20 193 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 RNF43Q68DV7 783 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 TCEAL6Q6IPX3 200 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 RETSATQ6NUM9 610 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 HDDC3Q8N4P3 179 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 PAF1Q8N7H5 531 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 GRIN3AQ8TCU5 1115 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 OR8D1Q8WZ84 308 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 PTPRN2Q92932 1015 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 TCEAL3Q969E4 200 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 MYO19Q96H55 970 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 PEBP4Q96S96 227 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 KCTD15Q96SI1 283 aaPredicted RBP10.36□□□□□ -0.75
HERC1-212ENST00000561348 PSMB7Q99436 277 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 CATSPERBQ9H7T0 1116 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 PARD6AQ9NPB6 346 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 FBXL12Q9NXK8 326 aa10.36□□□□□ -0.75
HERC1-212ENST00000561348 PPARGC1AQ9UBK2 798 aaKnown RBP10.36□□□□□ -0.75
HERC1-212ENST00000561348 FCF1Q9Y324 198 aaKnown RBP10.36□□□□□ -0.75
HERC1-212ENST00000561348 GON4LQ3T8J9 2241 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 FAM186AA6NE01 2351 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.35□□□□□ -0.75
HERC1-212ENST00000561348 SSU72P8A0A1W2PR75 194 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 TARSL2A2RTX5 802 aaKnown RBP10.35□□□□□ -0.75
HERC1-212ENST00000561348 PATE3B3GLJ2 98 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 DFFAO00273 331 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 KPNA3O00505 521 aaPredicted RBP10.35□□□□□ -0.75
HERC1-212ENST00000561348 SMAD6O43541 496 aaKnown RBP10.35□□□□□ -0.75
HERC1-212ENST00000561348 LRCH4O75427 683 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 FSBPO95073 299 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 EPN2O95208 641 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 SRCP12931 536 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 GOT1P17174 413 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 OXTRP30559 389 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 HNRNPH3P31942 346 aaKnown RBP10.35□□□□□ -0.75
HERC1-212ENST00000561348 ACSL1P33121 698 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 ARL4AP40617 200 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 NOP2P46087 812 aaKnown RBP10.35□□□□□ -0.75
HERC1-212ENST00000561348 MAPKAPK2P49137 400 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 PLK1P53350 603 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 PIGHQ14442 188 aaPredicted RBP10.35□□□□□ -0.75
HERC1-212ENST00000561348 SPA17Q15506 151 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 CST6Q15828 149 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 SYCP2LQ5T4T6 812 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.35□□□□□ -0.75
HERC1-212ENST00000561348 DSG4Q86SJ6 1040 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 SH2D3CQ8N5H7 860 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 ARFGAP1Q8N6T3 406 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 DCAF4L2Q8NA75 395 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 OR6K2Q8NGY2 324 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 ALG14Q96F25 216 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 ZC3H10Q96K80 434 aaKnown RBP10.35□□□□□ -0.75
HERC1-212ENST00000561348 CCDC114Q96M63 670 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 PHF12Q96QT6 1004 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 TM6SF2Q9BZW4 377 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 BTBD1Q9H0C5 482 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 CD248Q9HCU0 757 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 ITM2CQ9NQX7 267 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.35□□□□□ -0.75
HERC1-212ENST00000561348 KLHL11Q9NVR0 708 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 TMEM248Q9NWD8 314 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 OR51B4Q9Y5P0 310 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 PIEZO1Q92508 2521 aa10.35□□□□□ -0.75
HERC1-212ENST00000561348 DMDP11532 3685 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms